Lonchura striata (white-rumped munia): 110476821
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Entry
110476821 CDS
T05897
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00310
Lysine degradation
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110476821 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110476821 (SETDB1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
110476821 (SETDB1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110476821 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
110476821 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
110476821
NCBI-ProteinID:
XP_021397760
UniProt:
A0A218UE46
LinkDB
All DBs
Position
25:274562..289480
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AA seq
1284 aa
AA seq
DB search
MDSQDMKELQQEVMEELGISMEELQEIIDKEVDNSEWVRQWKQQLEELEQCMKHKEEEVA
HVDQLIDDAVRAMDKCETLAKELYSMMGLRYRESSSEDEAPAATEVIEIPDEEEDDDVLS
VDSGWRRSSSSPRIFRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQE
SPGTAQPITVPAAPSNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGVGKKYKVKF
DNKGKSLLSGNHIAYDYHLSAERHHVGRRVVAKYKDGNQMWLYAGIVAETPNVKNKDRFL
IFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLEALPMGTASVSFSFPQEDKRCEWIYRGSTRLEPM
FSMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGTGPQYKTPEPAARPTSP
QPAEMECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPVAGRTLPAPQHRG
PSSGPSQPLHGMMDRVPSEPSYRAPLEKLFYLPHVCSYACLSRVRPMRSDQYRSRNPLLI
PLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCLDP
YVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTS
WEFLVGCDCKDGCRDKSKCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGVYECN
KRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDDDENTGTEELEE
SNEDSSDDNFCKDENFSTSSVLRSYATRRQTRGQRDHGPSETASKDSGPARPLGHDEPAT
APPCKLPVSEEIAKNKVASWLSSNSVAEGFQDGESSSFRMGEGGEAKAVKMEIPAEREKG
CASTPGDLNGETKAAKKEEPEEPTKTPGLSSLGRRYGYNPCPPRLEGIRRPVSGTVLLQS
RRRSLALPPSSENVLMVSSSTDSDEEHRAGQAPGTANDSDDIQTISSGSEEEEGEDKKNP
SSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEENC
YIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY
EVGSVEGKELLCCCGAIDCRGRLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcaggacatgaaggagctgcagcaggaggtgatggaggagctgggaatctcc
atggaggagctccaggaaatcatcgacaaagaagtggacaactcggagtgggtgaggcag
tggaagcagcagctggaggagctggagcagtgcatgaagcacaaggaggaggaggtggcc
cacgttgaccagctcattgacgatgccgtgagggccatggacaagtgcgagacgctggcc
aaggagctgtactccatgatgggcctgcggtaccgggagagcagctcggaggacgaggcg
ccggcggccaccgaagtgatcgagattccggacgaggaggaggacgacgacgtcctgagc
gtggactcgggctggaggcgcagcagcagcagtcccagaatcttcagggatcagagtctg
ctgcgggaagcaatggctgccatgaggaaatctgcccgggatgttgcaaaattcatggat
gctgtaaacaagaaaaccaacttgcaggaagcacagaaagatgcacaaccccctcaggaa
tctcctggcactgcccagcccatcactgtccctgcagcccctagcaatgatctcaacact
gatggggacctcaaagtgggcatgaggattttggggaaaaaaagaacgaagacgtggcac
aaggggacgttgattgccatccagacggtcggtgttggcaagaaatacaaagtgaaattt
gataataaaggaaagagtttgctctcgggcaaccacattgcctacgattaccacctgtct
gctgagaggcaccacgtgggcaggagggtggtggccaagtacaaggatggcaatcagatg
tggctctatgctgggatcgtagctgagacccccaacgtgaagaataaagacaggttcctg
atcttctttgatgatggctacgcgtcgtacgtgaaggagtgggagctgtacccggtctgc
cggccactgaaaaaggcttgggaagacattgaggacgtttcctgtcgggatttcattgag
gaatacatcactgcctatcccaaccggcccatggtgctgctgaagaatgggcagctgatc
aaaactgagtgggaagggacctggtggaaatccagagtggaagaagtggatggaagtctg
gtgaaaatccttttcctggaagctcttcccatgggaactgcaagtgtttccttctcgttc
ccacaagaggacaaacgttgcgagtggatttaccgaggttccacacgcctcgagcccatg
ttcagcatgaaaacttccacagcttccacccaggagaagaagcaaagtgggcaaaccagg
actcgtcccaacgttggtgctgtgaggagcaagggtcctgtggtccagtacacccaggat
ttagcaggaactggtcctcagtacaagactccagagccagctgcacgtcccacgtctcct
cagcctgcggagatggaatgctctgacacccagctggcccagggcagaaagcaggtggcc
aagaaaagcacttccttccgtcctggctccgtgggctccgggcactcgtccccgtcctcc
cctgtcctcggggacaccccggtggccgggaggacgctcccggccccgcagcaccgcggc
cccagcagcggcccctctcagcccttgcacgggatgatggaccgcgttcccagcgagccg
tcctaccgcgccccactggagaagctcttctacctgccgcacgtgtgcagctacgcctgc
ctgtcgcgggtgcggcccatgcgcagcgaccagtaccgcagccggaacccgctgctcatc
ccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaaccgcaagatgggc
ttccacgtgctctacaaaacgccctgcgggctctgcctgcgctccatgcacgagatcgag
cgctacctcttcgagacggactgcgacttcctgttcctggagatgttctgcctggatccc
tacgtgctggtggatcgcaagttccagccctacaagccttactactacatcgccgacatc
accaagggcaaggaggacgtgccgctgtcgtgcgtcaacgagatcgacaacacgccgccg
ccgcaggtggcctacagcaaggagcggatccccgggaaaggggtgtacatcaacaccagc
tgggagttcctcgtgggctgtgactgcaaggacggctgcagggacaaatccaagtgtgcc
tgtcaccagctgaccatccaggccagtggctgcacccctggagggcaaatcaaccccaac
tcaggctaccagcacaagcggctggaggaatgtctcccaacaggcgtttacgagtgcaac
aagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtccagcacggcctccag
gtgcggctgcagctcttcaagacccagaacaaaggttggggcattcgctgcctcgacgac
attgccaagggctcctttgtctgcatctacgcagggaaaatcctcacggatgactttgct
gacaaagaggggctggagatgggtgacgagtactttgccaacctggaccacatcgagagc
gtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcggacaacagcggc
gtggacctcaaggacgacgacgacgacgacgagaacacgggcacggaggagctggaggaa
tccaacgaggacagctccgacgacaacttctgcaaggacgagaacttcagcacgagctcg
gtgctgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccacggcccctcg
gagacggcctccaaggactcggggccagcgcggcccctcggccacgacgagcccgccacg
gccccgccctgcaagctgcccgtgtccgaggagatcgccaagaacaaagtggcctcgtgg
ctgagctccaacagcgtggccgaaggcttccaggacggcgaatcctcatccttcaggatg
ggcgaaggaggagaagccaaggctgtgaagatggagatccctgctgagagggagaagggc
tgtgcttccacgccgggagatctgaacggagagacaaaggcagccaagaaggaggaacct
gaagaaccaaccaaaactcctgggctgagcagcttgggaaggaggtatggctacaacccg
tgcccgcccaggctggagggcatccgcaggccggtgagtgggacggtgctgctgcagagc
cgccggcggtccctggccctgccgccctcctcggagaatgtgctgatggtgtcgagcagc
accgacagcgacgaggagcacagggcagggcaggccccgggcacagccaacgacagcgac
gacatccagaccatttcctcaggatccgaggaggaggaaggggaggacaagaaaaatcca
tcatctgggtcaggtcccgtgaagagacaggtggctgtgaaatccacccgaggcttcgcc
ctgaagtccacccacggcatcgccatcaaatccacgccgctggcggcggccgacaagggc
gagagcgcggggcccgtgcgccgcagcacgcggcagttctacgacggggaggagaactgc
tacatcatcgacgccaagctcgagggcaacctgggccgctacctcaaccacagctgcacc
ccaaacctcttcgtgcagaacgtcttcgtggacacccacgaccttcgcttcccctgggtc
gccttcttcgccagcaagcggatccgagcgggcacggagctgacctgggattacaactac
gaggtcggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgactgccgg
ggccggctgctctga
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