Lonchura striata (white-rumped munia): 110478298
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Entry
110478298 CDS
T05897
Symbol
OGDH
Name
(RefSeq) 2-oxoglutarate dehydrogenase complex component E1 isoform X1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00020
Citrate cycle (TCA cycle)
lsr00785
Lipoic acid metabolism
lsr01100
Metabolic pathways
lsr01200
Carbon metabolism
lsr01210
2-Oxocarboxylic acid metabolism
Module
lsr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lsr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
110478298 (OGDH)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
110478298 (OGDH)
Enzymes [BR:
lsr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
110478298 (OGDH)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
110478298
NCBI-ProteinID:
XP_021400522
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All DBs
Position
22:5576634..5603045
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AA seq
1031 aa
AA seq
DB search
MLNLRTCAAKLRPLTASQTVKTISQHRPAAPRTFQQLRCYSAPVAAEPFLSGTSSNYVEE
MYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPPPLTTSLSTLSQAQSLIQAQPNVD
KLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSPNVDLAVFKERLRVLT
VGGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQ
CQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPAL
KTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYH
LGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHG
DAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNA
PIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQI
RKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWP
GFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRT
VDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQ
APYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWV
RQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNC
STPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDSGPAA
QNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAE
LVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDT
AFNLDAFKDLA
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacttaaggacttgtgcagcaaaactgaggccgttgacggcctcacagactgta
aagacaatttcccaacacagaccggcagcacccaggacgttccaacagctcaggtgctac
agtgcaccggtggctgccgagccatttctgagtgggactagttcaaactatgttgaggaa
atgtattatgcttggctggaaaatcccaaaagtgtacataagtcatgggacatctttttt
cgcaacgccaatgctggagctgctccaggcacggcttaccaaagcccccctccactgact
accagcctctccaccctgtcccaagcccagtccctcattcaggctcagcctaatgtggat
aaactggtagaggaccatcttgcagtgcaatctctcatcagggcgtatcaggtcaggggt
caccacattgcaaagcttgatcctctcggcattagttgtgtaaattttgatgatgcgcca
gtaactgtttctccaaacgtcgaccttgcagtgttcaaggagcggctgagagtgttaaca
gtaggaggcttttatggtctggatgaatctgacctcgacaaagttttccacttgcccaca
actactttcatcggtggaaatgaatcagctcttccactccgggaaatcatccgtcggctc
gagatggcatactgccagcacattggtgtggagttcatgttcatcaacgacctggagcag
tgccagtggatccggcagaagtttgagaccccaggcatcatgcagttcaccaatgaagag
aagcgcacgctgctggccaggctggtccgctctaccaggtttgaggagttcctccatcgg
aaatggtcttcagagaagcgttttggtctggagggatgcgaagtgctgatcccagcctta
aagaccattattgataagtcaagtgagaagggagtggattatgtgatcatgggaatgccc
cacaggggacgcctgaatgttcttgccaacgtgatcaggaaagagctggagcagatattc
tgccagtttgactccaagctggaggctgctgatgagggctctggtgacgtgaagtaccat
ctgggaatgtaccatcggcggattaaccgcgtcactgacaggaacatcaccctttccttg
gtggcaaatccttctcatttggaagcagctgatcctgttgttcaaggcaagactaaggca
gagcagttttactgtggagacacggaggggaagaaggtgatgtccatcctcctgcatgga
gatgctgcatttgcagggcaaggcattgtgtacgagacatttcacctgagtgaccttccc
tcctacaccacccacggcactgtccatgttgtggtcaacaaccagattggcttcacaaca
gacccccggatggcccgctcctccccataccccactgacgtagcccgggtggtcaacgcg
ccaatcttccacgtcaatgccgacgaccctgaggccgtggtctatgtctgcaatgtggca
gcagaatggcgaagcaccttccacaaagacgtggtggtggacttggtttgttacaggcgc
aacggacacaatgagatggatgaacctatgttcacgcaacccctgatgtacaaacagatc
cggaaacagaagccagtgttgcagaaatacgcagagctgctgatttcccagggggtggta
aatcagccggagtatgaggaggaaattgccaagtacgataagatttgtgaggaggcccat
gccagatccaaggatgagaagatcttgcacatcaaacactggctggactcaccttggcca
ggtttcttcactttggacgggcagccccggagcatgacctgcccttccactggcctcaat
gaagaggacctgacgcacattggtcaagtggccagctcagtgccggtggaggatttcact
atccatggaggtttgagccgtattctgaaaacccgtggggagatggtgaagaaccggaca
gtcgactgggccctggcagagtacatggcatttggctccctgctcaaagagggcatccac
atccgcctgagtggccaggatgttgagagggggacatttagccatcgccaccatgtcctt
catgatcagaatgtggacaagaggacctgtatccccatgaaccacctctggcccaaccag
gctccgtacactgtctgcaacagctccctgtcagagtacggtgtcttgggatttgaactg
gggtttgccatggccagtcccaatgccctggtgctttgggaagcccagtttggggatttc
cacaacactgctcaatgcattatcgaccagttcatctgtcccgggcaggccaagtgggtc
aggcagaacggcattgtcctgctgcttccccacggcatggagggcatgggtcccgagcac
tcctctgcccgcccagagcgattcctgcagatgtgcaatgatgatcctgatgtcttccct
aagctggatgactttgatgtgcgtcagctctatgagtgcaactggattgtcgtgaactgc
tccactccagccaacttcttccacgtcctccggcgccagatcctcctgcctttccgcaaa
ccgctgataatcttcactccaaagtcactgctgcgccaccccgaagcccgctccagcttt
gatgacatgctgccaggcacccacttcctccgtgtcatccctgacagtggccctgcagcc
cagaaccccgagcaggtgaagcgggtgctgttctgcactggcaaggtgtactatgacctg
acccgtgagcgcaaggcccggcagatggaggccgatgtggccatcaccagggtggagcag
ctctccccgttcccctttgacctcctccagcgagaagcccagaaatacccagctgccgag
ctggtgtggtgccaggaggagcacaagaaccagggttactatgactatgtcaaaccccgg
cttcgcaccaccatcaaccgtgcaaagcctgtctggtatgcagggcgggagccagcagct
gcccctgccactggcaataagaaaacccacctgacagagctgcagcggctactcgataca
gccttcaacctcgatgccttcaaggacctggcttga
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