Lonchura striata (white-rumped munia): 110478966
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Entry
110478966 CDS
T05897
Symbol
PBX1
Name
(RefSeq) pre-B-cell leukemia transcription factor 1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110478966 (PBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110478966 (PBX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110478966 (PBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
HTH_3
UCH
Sec15_C
LZ3wCH
EF-hand_2
Motif
Other DBs
NCBI-GeneID:
110478966
NCBI-ProteinID:
XP_021401641
UniProt:
A0A218V5K7
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Position
8:complement(2075421..2197916)
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AA seq
358 aa
AA seq
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MKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAA
AAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPI
SPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYF
YSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVT
ATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQSLNGDSYQGAQVGANVQSQVD
TLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATTPSSVTSPTEGPGSVHSDTSN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggcgctttttaatgtcttgtgtgaaatcaaagaaaaaacagtgctgagcatc
cggggggcgcaggaggaggagcccacggacccccagctgatgaggttagacaacatgctc
ctggccgagggggtggcgggccccgagaagggagggggctcggccgccgccgccgccgcc
gccgccgcgtccggaggagccggctccgacaactcggtggagcactccgactacagagcc
aaactctcccagatcagacagatctaccacacggagctggagaagtacgagcaggcgtgc
aacgagttcaccacgcacgtgatgaacctgctgcgcgagcagagccggacccggcccatc
tcgcccaaggagatcgagcggatggtgagcatcatccaccgcaagttcagctccatccag
atgcagctgaagcagagcacgtgcgaagccgtcatgatcctgcgctcgcggtttctggat
gcacggcggaagagacgaaacttcaacaagcaagccacggaaatcctgaatgagtatttc
tattcccatctcagcaacccttatcccagtgaggaagccaaagaagagctagccaagaaa
tgtggcatcacagtctcacaggtatcaaactggtttggaaataagagaatccggtacaag
aagaacataggtaaatttcaagaggaagccaatatttatgctgccaaaacggctgtcacg
gctaccaatgtgtcagcccatggaagccaggctaactcaccctcaactcccaattcagct
ggttcttccagttcttttaacatgtcaaactctggagatttgttcatgagcgtgcagtct
ctcaatggggattcttaccaaggggcccaggttggagccaacgtgcagtcacaggtggat
acccttcgccatgttatcagccagacaggaggatacagtgacggactcgcggcaagtcag
atgtatagtccgcagggcatcagtgctaatggaggttggcaagacgctactaccccatcg
tcggtgacctcccccacagaaggccctggcagcgttcactctgatacctccaactga
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