Lonchura striata (white-rumped munia): 110479210
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Entry
110479210 CDS
T05897
Symbol
ITCH
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
lsr04144
Endocytosis
lsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110479210 (ITCH)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110479210 (ITCH)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110479210 (ITCH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110479210 (ITCH)
04121 Ubiquitin system [BR:
lsr04121
]
110479210 (ITCH)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110479210 (ITCH)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110479210 (ITCH)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
HECT type E3
110479210 (ITCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
110479210
NCBI-ProteinID:
XP_021401972
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All DBs
Position
20:9460826..9519741
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AA seq
878 aa
AA seq
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MAGSGSRSGPASGLSMKSQLQITVISAKLKEKNKWFGPSPYVEVSVDGQSKKTEKCNNTN
SPKWKQHLTVIVTPVSKLNFRVWSHQTLKSDVLLGSAALDIHETLKSNSMKLEQVVVTLH
LVGDREPAEVVGDLSVCLDGMQVDPELLTNGEASSTRSPTQNESSRIRSDTRTNSNGLEN
GEDAASSENKTVNGSDSPLLTNGNCKPARPPRPARPPPPTPRRPPSVAASANGPSSTSTE
SDGASAGSLAGTASNTPSEQSPEGATAASTAPATPALTTPPVSRQVHPVNPSPQALTTVS
QGPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPSWERRVDNMGRIYYVDHFTRTT
TWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDFSSTQNKEFDPLGPLPHGWE
KRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTT
YIDPRTGKSALDNGPQIAYVRDFKAKVHYFRFWCQQLAMPQHIKITVSRKTLFEDSFQQI
MSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQIN
PASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKAVGLKDLESVDPEFY
NSLIWVKENDIEECGLEMFFSVDKEILGEIKSHDLKPNGSNILVTEENKEDYIRLVAEWR
LSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRT
SRQIVWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWL
PRSHTCFNRLDLPPYKNYEQLKEKLLFAIEETEGFGQE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagtgggtccagatcaggaccagccagtgggttgtctatgaaatcacagctt
cagatcactgttatttcagcaaaactaaaagaaaagaataaatggtttggacctagccct
tatgtggaagtttcagtagatggacagtcaaagaagacggaaaaatgcaacaatacaaat
agtccaaagtggaagcagcatcttacagtaattgtcactcctgtaagtaaattaaatttt
cgagtctggagccatcaaacattaaagtctgatgtccttctgggaagtgctgctctggat
attcacgagacattgaaatccaacagtatgaaactggagcaggtagtggtgacgttgcac
cttgttggtgacagggagccagcagaagtggtgggagatctgtcagtctgtctggatgga
atgcaggttgaccctgagctgctgaccaatggggaagcttcaagtacaagaagtcctaca
cagaatgaaagctccagaataagaagtgatacacggactaactcaaatggccttgaaaat
ggtgaggatgctgcttccagtgaaaacaagactgttaacggcagtgactctccgttactc
acaaatggaaactgcaaacctgccagacctcccaggcctgccaggcccccgccccccact
ccccgcagacccccatcggtcgctgcaagtgcaaatggtccttcatccacatccacagaa
agcgatggggccagtgcaggatcactggctggtacagcctcaaatacaccttcagagcag
agccctgagggggcaacagccgcaagcacagctcctgccactcctgcactcaccactcct
ccagtgtcaagacaagtccatccagtaaatccttcacctcaggctcttactacagtcagc
caaggtcctcttccacctggttgggagcaaagagtagaccagcatggtcgagtgtactac
gtggatcatgttgaaaaacgaacaacgtgggatcggccagagcctcttcctccaagctgg
gagcgccgagttgacaacatggggaggatttattacgttgaccacttcaccagaacgaca
acatggcagagaccaacgctggagtctgtccggaattacgagcagtggcagctccagcgc
agccagctccagggagccatgcagcagttcaaccagaggttcatatatgggaatcaggac
ttttcatccacacaaaacaaagagtttgatcctcttggccctctgccacatggatgggaa
aagagaactgacagcaatggcagagtgtattttgtcaatcacaacacacgaatcactcag
tgggaagaccccaggagtcagggtcagttaaatgagaagcccttgccagagggctgggaa
atgcgatttactgtggatggaattccctattttgtggatcacaatagaagaaccactaca
tacatagatccccgcacgggcaagtctgctctagacaatggaccccagatagcttatgtg
cgtgatttcaaggctaaggtccattatttcagattctggtgtcagcaactggcaatgcca
cagcacataaagatcacagtgagcaggaaaacattatttgaggactcatttcagcagata
atgagcttcagccctcaggatctccggagacgtttatgggttattttccctggtgaagaa
ggtttagattatggaggtgtggcaagggagtggttctttctattgtcacatgaagtcttg
aaccccatgtattgcctgtttgaatatgcagggaaagataactactgcttacagataaac
ccagcctcttacatcaacccagaccacctgaaatacttccgattcattgggaggttcatt
gccatggctttgttccatgggaagttcattgacactggtttctctctgccattctataaa
cgtatcctaaacaaggcagtaggactcaaggatttggaatctgttgacccagagttttac
aactctctcatctgggtaaaagagaatgatattgaagaatgtggcttggaaatgtttttt
tctgttgataaagaaatactaggtgaaatcaaaagccatgatttgaagccaaatggtagc
aacattctggtcacagaagaaaataaagaagactacatcaggctagtagcagaatggaga
ctgtcccgaggtgttgaggagcagacacaggctttctttgaaggcttcaatgaaatactg
ccacaacagtatttgcagtattttgatgcaaaggaactggaggtgcttctctgtggaatg
caagaaattgacctgaatgactggcagagacacaccatctacaggcactataccaggacc
agcaggcagattgtgtggttctggcagtttgtgaaagaaatagataatgagaagaggatg
agacttttgcagtttgtgactggaacatgcagattgccagtgggaggatttgctgacctc
atggggagcaatggaccccaaaaattctgtattgagaaagtgggaaaggaaaattggtta
cccagaagtcatacctgtttcaatcgcttagaccttccaccatataaaaattatgagcag
ttaaaggaaaagctgttatttgcaattgaagaaacagaaggatttgggcaagagtag
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