Lonchura striata (white-rumped munia): 110479753
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Entry
110479753 CDS
T05897
Name
(RefSeq) actin, cytoplasmic type 5
KO
K05692
actin beta/gamma 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03082
ATP-dependent chromatin remodeling
lsr04145
Phagosome
lsr04210
Apoptosis
lsr04510
Focal adhesion
lsr04517
IgSF CAM signaling
lsr04518
Integrin signaling
lsr04519
Cadherin signaling
lsr04520
Adherens junction
lsr04530
Tight junction
lsr04810
Regulation of actin cytoskeleton
lsr04814
Motor proteins
lsr04820
Cytoskeleton in muscle cells
lsr05100
Bacterial invasion of epithelial cells
lsr05132
Salmonella infection
lsr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110479753
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110479753
04518 Integrin signaling
110479753
04519 Cadherin signaling
110479753
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110479753
09143 Cell growth and death
04210 Apoptosis
110479753
09144 Cellular community - eukaryotes
04510 Focal adhesion
110479753
04520 Adherens junction
110479753
04530 Tight junction
110479753
09142 Cell motility
04814 Motor proteins
110479753
04820 Cytoskeleton in muscle cells
110479753
04810 Regulation of actin cytoskeleton
110479753
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110479753
09171 Infectious disease: bacterial
05132 Salmonella infection
110479753
05100 Bacterial invasion of epithelial cells
110479753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110479753
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110479753
03036 Chromosome and associated proteins [BR:
lsr03036
]
110479753
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110479753
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110479753
04147 Exosome [BR:
lsr04147
]
110479753
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110479753
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110479753
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
110479753
NuA4 complex
110479753
Chromatin remodeling factors
BAF complex
110479753
PBAF complex
110479753
GBAF(ncBAF) complex
110479753
SWR1 complex
110479753
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
110479753
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
110479753
Exosome [BR:
lsr04147
]
Exosomal proteins
Proteins found in most exosomes
110479753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
110479753
NCBI-ProteinID:
XP_021402926
LinkDB
All DBs
Position
10:2123765..2126449
Genome browser
AA seq
376 aa
AA seq
DB search
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagattgctgccctggtggtggacaacggctcggggatgtgcaaggcg
ggcttcgcgggcgacgacgcgccccgcgccgtcttcccctccatcgtggggcggccgcgg
caccagggcgtcatggtgggcatggggcagaaggacagctacgtcggggacgaggcgcag
agcaagaggggcatcctgactctcaagtaccccatcgagcacggtatcgtcaccaactgg
gatgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggcccccgag
gagcacccggtgctgctcacagaggcgcccctcaaccctaaagccaacagggagaagatg
acgcagatcatgttcgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtccctctacgcctcgggccgcaccacgggcatcgtgatggactccggcgacggcgtc
acccacaccgtgcccatctacgagggctacgccctgccccacgccatcctgcgcctggac
ctggccggccgcgacctcaccgactacctcatgaagatcctcactgagaggggctacagc
ttcaccaccacggccgagcgcgagatcgtgcgcgacatcaaggagaagctgtgctacgtg
gcgctggacttcgagcaggagatggccacggccgcctcctcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtcatcaccatcggcaacgagcgcttccgctgccccgag
tccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatcaggaaggacctgtacgccaacaccgtgctc
tcggggggcaccaccatgtacccgggcatcgccgaccgcatgcagaaggagatcacggcg
ctggcgcccagcaccatgaagatcaagatcattgccccgccggagcgcaagtactcggtg
tggatcggcggctccatcctggcctcgctctccaccttccagcagatgtggatcagcaag
caggagtacgacgagtcgggcccctccatcgtgcaccgcaaatgcttctag
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