KEGG   Lonchura striata (white-rumped munia): 110479753
Entry
110479753         CDS       T05897                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03082  ATP-dependent chromatin remodeling
lsr04145  Phagosome
lsr04210  Apoptosis
lsr04510  Focal adhesion
lsr04517  IgSF CAM signaling
lsr04518  Integrin signaling
lsr04519  Cadherin signaling
lsr04520  Adherens junction
lsr04530  Tight junction
lsr04810  Regulation of actin cytoskeleton
lsr04814  Motor proteins
lsr04820  Cytoskeleton in muscle cells
lsr05100  Bacterial invasion of epithelial cells
lsr05132  Salmonella infection
lsr05164  Influenza A
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110479753
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    110479753
   04518 Integrin signaling
    110479753
   04519 Cadherin signaling
    110479753
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110479753
  09143 Cell growth and death
   04210 Apoptosis
    110479753
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110479753
   04520 Adherens junction
    110479753
   04530 Tight junction
    110479753
  09142 Cell motility
   04814 Motor proteins
    110479753
   04820 Cytoskeleton in muscle cells
    110479753
   04810 Regulation of actin cytoskeleton
    110479753
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110479753
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110479753
   05100 Bacterial invasion of epithelial cells
    110479753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsr03021]
    110479753
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110479753
   03036 Chromosome and associated proteins [BR:lsr03036]
    110479753
   03029 Mitochondrial biogenesis [BR:lsr03029]
    110479753
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsr04812]
    110479753
   04147 Exosome [BR:lsr04147]
    110479753
Transcription machinery [BR:lsr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110479753
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     110479753
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     110479753
    NuA4 complex
     110479753
  Chromatin remodeling factors
   BAF complex
    110479753
   PBAF complex
    110479753
   GBAF(ncBAF) complex
    110479753
   SWR1 complex
    110479753
Mitochondrial biogenesis [BR:lsr03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    110479753
Cytoskeleton proteins [BR:lsr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     110479753
Exosome [BR:lsr04147]
 Exosomal proteins
  Proteins found in most exosomes
   110479753
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 110479753
NCBI-ProteinID: XP_021402926
LinkDB
Position
10:2123765..2126449
AA seq 376 aa
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcggacgaggagattgctgccctggtggtggacaacggctcggggatgtgcaaggcg
ggcttcgcgggcgacgacgcgccccgcgccgtcttcccctccatcgtggggcggccgcgg
caccagggcgtcatggtgggcatggggcagaaggacagctacgtcggggacgaggcgcag
agcaagaggggcatcctgactctcaagtaccccatcgagcacggtatcgtcaccaactgg
gatgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggcccccgag
gagcacccggtgctgctcacagaggcgcccctcaaccctaaagccaacagggagaagatg
acgcagatcatgttcgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtccctctacgcctcgggccgcaccacgggcatcgtgatggactccggcgacggcgtc
acccacaccgtgcccatctacgagggctacgccctgccccacgccatcctgcgcctggac
ctggccggccgcgacctcaccgactacctcatgaagatcctcactgagaggggctacagc
ttcaccaccacggccgagcgcgagatcgtgcgcgacatcaaggagaagctgtgctacgtg
gcgctggacttcgagcaggagatggccacggccgcctcctcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtcatcaccatcggcaacgagcgcttccgctgccccgag
tccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatcaggaaggacctgtacgccaacaccgtgctc
tcggggggcaccaccatgtacccgggcatcgccgaccgcatgcagaaggagatcacggcg
ctggcgcccagcaccatgaagatcaagatcattgccccgccggagcgcaagtactcggtg
tggatcggcggctccatcctggcctcgctctccaccttccagcagatgtggatcagcaag
caggagtacgacgagtcgggcccctccatcgtgcaccgcaaatgcttctag

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