KEGG   Lonchura striata (white-rumped munia): 110480017
Entry
110480017         CDS       T05897                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain
  KO
K06752  MHC class II antigen
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04145  Phagosome
lsr04514  Cell adhesion molecules
lsr04672  Intestinal immune network for IgA production
lsr05164  Influenza A
lsr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110480017
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110480017
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    110480017
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110480017
   05168 Herpes simplex virus 1 infection
    110480017
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsr04147]
    110480017
Exosome [BR:lsr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110480017
  Exosomal proteins of epithelial cells
   110480017
  Exosomal proteins of breast milk
   110480017
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_2 C2-set_2 ig
Other DBs
NCBI-GeneID: 110480017
NCBI-ProteinID: XP_021403360
LinkDB
Position
Unknown
AA seq 250 aa
MGLGAAAGAVLVALVALGAAPAAGAELSGVFQELGTSECYFTNGTEKVRFVERYIYNREQ
YLMFDSDVGEYVGFNPYGEKNAKRLNSDPERMEYKRGLVDTYCRHNYRIVTPFSVERRVP
PSVSISLVPSSSQPGPGRLLCSVLDFYPAPIQVRWFQGQQELSEHVVATDVVPNGDWTYQ
LLVLLETPPRRGLTYTCQVEHGSLEQPLSRHWEMPPDAARSKMLTGIGGFVLGSVFLALG
LGFYLRKKSS
NT seq 753 nt   +upstreamnt  +downstreamnt
atggggctcggggcggcagccggggccgtgctggtggcactggtggcgctgggagccgcc
ccggctgcgggcgcggagctctcgggggtgttccaggagctgggaacgtccgagtgctac
ttcacgaacggcacggagaaggtgaggttcgtggagcggtacatctacaaccgggagcag
tacctgatgttcgacagcgacgtgggggagtacgtggggttcaacccctatggggagaag
aatgccaagcgcttgaacagcgacccggaaaggatggagtacaaacggggtctagtggac
acgtactgccggcacaactaccggattgtcaccccgttcagcgtggagcgccgagtgccc
cccagcgtgtccatctcgctggtgccctcgagctcccagcccggccccggccgcctgctc
tgctccgtgctggatttctaccctgccccgatccaggtgaggtggttccagggccagcag
gagctctcggagcacgtggtggccaccgacgtggtccccaacggggactggacctaccag
ctgctggtgctgctggaaacccccccccggcgcgggctcacctacacctgccaggtggag
cacggcagcctggagcagcccctgagccgccactgggagatgccgccggacgccgcccgc
agcaagatgctgacgggcatcgggggcttcgtcctgggctcggtcttcctggcgctgggg
ctcggcttctacctgcgcaagaagagctcctga

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