Lonchura striata (white-rumped munia): 110480079
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Entry
110480079 CDS
T05897
Symbol
RNF128
Name
(RefSeq) E3 ubiquitin-protein ligase RNF128 isoform X1
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110480079 (RNF128)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110480079 (RNF128)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110480079 (RNF128)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
zinc_ribbon_16
DUF7248
E3_UbLigase_R4
zf-C3H2C3
zf_RING_Vps8_fungal
zf-Nse
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
110480079
NCBI-ProteinID:
XP_031360660
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Position
4A:12194156..12221115
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AA seq
415 aa
AA seq
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MPSGAALLALAALLCAVPPPGPRGAAAAAAWTAWLNVSWENGVDRNRSGWEAGESGLYGL
DSPLQPAEGLLVLPDSPDAFNACSALTNFSGAPAGAPGWLALIERGGGCSFADKIRLAAR
RGAAAAVIYNYRGTGNEVLPMSHHGAEKIVAIMIGNLKGMEILHRIQSGLKVTMVIEVGK
KRSLSMNIFTILFISVSFFVVAAATVGCYVSYSARRLIMARAQSREQRRLRARAKKAIEQ
MQLRTLKEGDKETGPDGDSCVVCFEQYKPNDVMRVLTCNHVFHKTCIDPWLLEHGTCPLC
KCDILKVLGVEMDVEPQSEPVQAPGSSGQRPLSTVTIVNEEDNLSETASSGYDSVQGPDE
SAQEAQAPSENDNTHPVSEESQPSTVTVLSHGDNPGFEGDETQVCESRIVCEVTF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgggggccgcgctgctggcgctggccgcgttgctttgcgccgtcccgccgccc
ggtccccgcggggcggcggcggcagcggcgtggaccgcctggctgaacgtgtcgtgggag
aacggcgtggaccgcaaccggagcggctgggaggcgggcgagagcggcctgtacgggctg
gactcgccgctgcagccggccgaggggctgctggtgctgcccgacagccccgacgccttc
aatgcctgcagcgcgctcaccaacttcagcggggcccccgcgggcgccccgggctggctc
gccctcatcgagcgcggcggcggctgctccttcgccgacaagatccgcctggccgcccgg
cgcggcgccgccgccgccgtcatctacaactaccgcggcaccggcaacgaggtgctgccc
atgtcccaccacggtgctgaaaagattgttgcaattatgattggcaacctgaaaggcatg
gagatcctgcaccggattcagagcggcttgaaagtcaccatggtcatcgaagtgggcaaa
aagcgcagtctttccatgaatatcttcaccatcctcttcatctctgtgtcattttttgtt
gtggcagcagcaactgtgggctgctatgtctcttactctgctcgaagactcattatggca
agggcccagtccagggagcagcggcggctgagggccagggctaagaaggccattgaacag
atgcagctgcgcaccctgaaggaaggagacaaggaaactggtccagatggagattcctgt
gttgtgtgctttgagcagtacaagccgaatgatgtaatgcgtgttctgacttgcaaccat
gtcttccacaagacctgtattgacccctggcttctggagcatgggacatgtcctctgtgc
aaatgtgacatcctcaaagtgttgggtgttgagatggatgtagaaccacagtctgagcct
gtgcaagccccaggatccagtggccaaagacctctatccactgtcactatagttaatgaa
gaggacaatcttagtgaaacagcatcatctggatatgattctgtacagggaccagatgaa
tctgctcaggaggcacaggcaccatcagaaaatgacaacacgcatcctgtgagtgaagag
tcccagccctccactgtgactgtcctttcacatggtgacaacccaggttttgagggagat
gaaacacaagtttgtgaaagcagaattgtttgtgaagtcacgttctaa
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