Lonchura striata (white-rumped munia): 110480811
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Entry
110480811 CDS
T05897
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03250
Viral life cycle - HIV-1
lsr03260
Virion - Human immunodeficiency virus
lsr04060
Cytokine-cytokine receptor interaction
lsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110480811 (CD4)
03260 Virion - Human immunodeficiency virus
110480811 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110480811 (CD4)
04514 Cell adhesion molecules
110480811 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lsr04090
]
110480811 (CD4)
CD molecules [BR:
lsr04090
]
Proteins
110480811 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_2
ig
Tcell_CD4_C
Ig_3
C2-set
Egh16-like
CD4-extracel
V-set_CD47
Sema4F_C
C1-set
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
110480811
NCBI-ProteinID:
XP_031359590
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All DBs
Position
1:complement(88182460..88186662)
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AA seq
485 aa
AA seq
DB search
MQPCGTALSCMPAAFLLLHLGLISSMAQQNEFQTGLTGGEVTLNCTGIPPDSQLFQDATV
VSWKYSDTLLWRMEKNTRYWKKPSFITGRANIKMQYKQLCVWNLKLSDAGIYTCEYGTHK
VHTSLHIFKLTISLDGHFLQNEVPELILIQNSSSPLPDLSIVLFDSDNNRIIPEIKSKSR
QKYIVKLKKLEIMDSGTWVCQVHSDSPLINRNISFAVNVLGFQNPDLERKYATVDSTVVL
SWHLNSQNIKWKEGFTGQLNWKQQESAKSHKLLDFNVTAQGQLHETKKSNNFLFEIPERK
PEGTIEVKLPKVHFNQSGQYQCQLEYQGRYSQSKIELVVMKVSANPAGPLSRGANMTLTC
QVSGQLPPNAYLRWERVNGTEMDMKNSKQREVKLEVNISAAGLWSCHLIEDSDKKISFHY
HVEDASVWIKYVRIGASIGGSLLAFALGCLCIISGISWQRRRQRTKRMAQARQYLLENKT
CQCQQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgtgcggcacagccctgagctgcatgcctgctgccttcctgcttctgcatctg
ggcctgatctccagtatggctcagcaaaatgaattccagactggacttacaggaggagag
gtgaccctgaactgcacaggcatacctcctgattcacaattatttcaggatgccacagtt
gtgagctggaagtactctgatactcttctatggcgtatggaaaagaatactagatattgg
aaaaaaccatctttcattactggccgagctaacatcaagatgcaatataagcaactgtgc
gtgtggaatctgaagctctccgacgccggcatctacacctgtgaatacggcactcacaaa
gtccacacctcactgcacatctttaaattgacaatctctttggatgggcattttctgcag
aatgaagtccctgaactgattttaattcaaaattcatccagtcctcttcctgatctcagc
attgtattgtttgacagtgacaataacagaataataccagaaataaaaagcaagagccgt
caaaaatacatagtgaaattaaagaaactggagattatggacagcgggacctgggtgtgt
caggtccattcagactctccattgattaatcggaacatctcctttgctgtgaatgtatta
ggttttcagaatccagatttggaaagaaagtatgcaactgttgatagcactgtcgtcttg
tcatggcatctgaactcccagaatataaaatggaaagaaggtttcacaggacagctgaat
tggaaacaacaggaaagtgcaaaatctcataaactgcttgatttcaatgtcacagcacaa
ggacagctgcatgagactaaaaaaagcaacaactttctgtttgagatacctgaaagaaaa
cctgaaggtaccatagaagtgaagctccccaaagtccatttcaaccagtctggccagtac
cagtgccagctggagtaccaaggaagatattcacagagcaagatagagctggtggtgatg
aaagtctcagctaaccctgctgggccactctccagaggagccaacatgaccctgacctgc
caggtctctggacagctcccacccaatgcctacttgcgctgggaacgtgtgaatggcact
gagatggacatgaagaactcaaagcagcgtgaagtaaagttggaggtgaacatcagtgct
gcagggctgtggagctgtcacctcatagaagacagtgacaaaaagatcagctttcattac
cacgtggaggacgcttctgtttggattaaatatgtgagaattggagcaagcattggaggc
agcttattggcgtttgcccttgggtgcttgtgcatcatcagtggtataagctggcagcgg
agaaggcaacggacaaaaaggatggcacaagcaagacaatacttgctggaaaacaagaca
tgtcagtgccaacagtaa
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