KEGG   Lonchura striata (white-rumped munia): 110480811
Entry
110480811         CDS       T05897                                 
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03250  Viral life cycle - HIV-1
lsr03260  Virion - Human immunodeficiency virus
lsr04060  Cytokine-cytokine receptor interaction
lsr04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110480811 (CD4)
   03260 Virion - Human immunodeficiency virus
    110480811 (CD4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110480811 (CD4)
   04514 Cell adhesion molecules
    110480811 (CD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:lsr04090]
    110480811 (CD4)
CD molecules [BR:lsr04090]
 Proteins
  110480811 (CD4)
SSDB
Motif
Pfam: V-set Ig_2 ig Tcell_CD4_C Ig_3 C2-set Egh16-like CD4-extracel V-set_CD47 Sema4F_C C1-set TM_ErbB1
Other DBs
NCBI-GeneID: 110480811
NCBI-ProteinID: XP_031359590
LinkDB
Position
1:complement(88182460..88186662)
AA seq 485 aa
MQPCGTALSCMPAAFLLLHLGLISSMAQQNEFQTGLTGGEVTLNCTGIPPDSQLFQDATV
VSWKYSDTLLWRMEKNTRYWKKPSFITGRANIKMQYKQLCVWNLKLSDAGIYTCEYGTHK
VHTSLHIFKLTISLDGHFLQNEVPELILIQNSSSPLPDLSIVLFDSDNNRIIPEIKSKSR
QKYIVKLKKLEIMDSGTWVCQVHSDSPLINRNISFAVNVLGFQNPDLERKYATVDSTVVL
SWHLNSQNIKWKEGFTGQLNWKQQESAKSHKLLDFNVTAQGQLHETKKSNNFLFEIPERK
PEGTIEVKLPKVHFNQSGQYQCQLEYQGRYSQSKIELVVMKVSANPAGPLSRGANMTLTC
QVSGQLPPNAYLRWERVNGTEMDMKNSKQREVKLEVNISAAGLWSCHLIEDSDKKISFHY
HVEDASVWIKYVRIGASIGGSLLAFALGCLCIISGISWQRRRQRTKRMAQARQYLLENKT
CQCQQ
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcagccgtgcggcacagccctgagctgcatgcctgctgccttcctgcttctgcatctg
ggcctgatctccagtatggctcagcaaaatgaattccagactggacttacaggaggagag
gtgaccctgaactgcacaggcatacctcctgattcacaattatttcaggatgccacagtt
gtgagctggaagtactctgatactcttctatggcgtatggaaaagaatactagatattgg
aaaaaaccatctttcattactggccgagctaacatcaagatgcaatataagcaactgtgc
gtgtggaatctgaagctctccgacgccggcatctacacctgtgaatacggcactcacaaa
gtccacacctcactgcacatctttaaattgacaatctctttggatgggcattttctgcag
aatgaagtccctgaactgattttaattcaaaattcatccagtcctcttcctgatctcagc
attgtattgtttgacagtgacaataacagaataataccagaaataaaaagcaagagccgt
caaaaatacatagtgaaattaaagaaactggagattatggacagcgggacctgggtgtgt
caggtccattcagactctccattgattaatcggaacatctcctttgctgtgaatgtatta
ggttttcagaatccagatttggaaagaaagtatgcaactgttgatagcactgtcgtcttg
tcatggcatctgaactcccagaatataaaatggaaagaaggtttcacaggacagctgaat
tggaaacaacaggaaagtgcaaaatctcataaactgcttgatttcaatgtcacagcacaa
ggacagctgcatgagactaaaaaaagcaacaactttctgtttgagatacctgaaagaaaa
cctgaaggtaccatagaagtgaagctccccaaagtccatttcaaccagtctggccagtac
cagtgccagctggagtaccaaggaagatattcacagagcaagatagagctggtggtgatg
aaagtctcagctaaccctgctgggccactctccagaggagccaacatgaccctgacctgc
caggtctctggacagctcccacccaatgcctacttgcgctgggaacgtgtgaatggcact
gagatggacatgaagaactcaaagcagcgtgaagtaaagttggaggtgaacatcagtgct
gcagggctgtggagctgtcacctcatagaagacagtgacaaaaagatcagctttcattac
cacgtggaggacgcttctgtttggattaaatatgtgagaattggagcaagcattggaggc
agcttattggcgtttgcccttgggtgcttgtgcatcatcagtggtataagctggcagcgg
agaaggcaacggacaaaaaggatggcacaagcaagacaatacttgctggaaaacaagaca
tgtcagtgccaacagtaa

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