Lonchura striata domestica (Bengalese finch): 110480839
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Entry
110480839 CDS
T05897
Symbol
ATN1
Name
(RefSeq) atrophin-1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
110480839 (ATN1)
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
110480839
NCBI-ProteinID:
XP_021404783
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Position
1:complement(88073807..88095962)
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AA seq
1219 aa
AA seq
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MFSSNRAKENGGPTPKRMKTRQNKDSMSMRSGRKKETPGPREELRSRGRASPGGVSTSSS
DGKAEKSRQATKKGRLEESCTPKSSKQGRTEEISESEGEDTNAPKKTKTEELPCPPSPSD
VDSLDGHSFNDEMSSDPRDIDQDNRSTSPSVYSPGSVENDSDSSSVLSQGPSHSYHHPPL
FPESPPVAAPPDSLARPPEPGFGLPGEAHPQGPPAGSYHSQLEGQASRIFQAQAPQTPAS
SSSSSSSSAVAAPSAPPSSSSSSSSSSSSHAPLYPTANVVQVGAKIASGVGGLPAPGARE
QTLSAKHNPPPTTPISLASVGGGLPPQKTPPANPPAASPASAPSFPHVSSNLPPPPALRP
LNNAVAASSSPGMVGQALSGHLPSPHSMGQEKAPALAPSRYPYAPPPLPPSSSSAQYPQP
SPGQPLPSYSASYGHSFPPPSGLSVSSQPPKYTQPSLPSQPVWSQGPPPYSRPLGNAGSH
PAAPFPGQSAHHQQPPQQHHHGHGSSGGVSPAATAPPQPPGGYPHGLESSSHHPSHPTYG
LRLYPPHSQAAYSQAPSATAAAAPSSSSSSSSSSSSSSSSSSSSSSSAASSQGSYPSMCT
HPPGQSPATYTFPPPPPPSPAHGAGPPVTSAATTLSTVIATMASPSAAPYKTASPPVPPS
AVAPYGKRAASPVPTFQPPAPYKPGSPPTSSAAPFRAATPPGYRVASSPVAGGYKAPSPA
PSAPPPLPGSMAAPAPPPPQLPLSAAQIKQEPSEEYEPPESPVPPARSPSPPPKVVDVPS
HASQSARFNKHLDRGFNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQKAREEKERE
REREREKEREREKERELERSVKMAQEGRPVECSSLGPVPHRPSFEQGSAVATVPPYLGPD
TPALRTLSEYARPHVMSPSNRNHPFYVPLGAVDPGLLGYNVPAIYSSDPATRERELRERE
ARERDLRDRDLRERLKPGFEVKPAELEQLHAVPAAAMDPFPRHGGLSLQTAPGLHPAFPF
HPGLGHLERERLALAAGPTLRPDMSYAERLAAERQHAERVAALSNDPLARLQMLNVTPHH
HQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASGSHLTRIPYPAGTIPNPLLPHPLHEN
EVLRHQLFAAPYRDLPGSLSAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHGVP
LPTQEDYYSHLKKESDKPL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcaaaccgggccaaggagaatgggggtcccacacccaaaagaatgaagaca
cgacagaacaaggactcaatgtcaatgcggagtggacggaagaaagagactccggggcct
cgagaggagctcaggtcacggggtcgagcttctcctggtggtgtcagcacctccagcagt
gatggcaaggctgagaaatcccgacaagcaacaaagaaaggccggttggaggaatcctgc
acccccaagagcagcaagcagggacgaacagaagagatctcagagagcgagggggaggac
accaatgctcccaaaaaaaccaaaactgaggagttgccctgtcctccatccccatcggat
gttgacagccttgatggccacagcttcaatgatgagatgagcagcgacccgcgggacatt
gaccaggataacaggagcacctcgcccagtgtctacagccctgggagcgtggagaacgac
tccgactcctcttctgtgctgtcccaggggccgtctcactcctaccaccaccccccgctc
ttccccgagagcccgccggtcgctgcccctcccgacagcctggcccgtccaccagagccc
ggctttgggctcccgggcgaggcgcacccccagggaccccccgcaggaagttaccattcc
cagctggagggccaggcctcccgcattttccaggctcaagccccacagacacctgcctcc
tcctcctcctcttcctcttcctctgctgttgctgccccgtctgctcccccttcctcctcc
tcatcctcttcctcctcctcttcctcccacgctcccctttatcctacggccaatgtggtc
caggttggggccaaaattgccagtggagtgggggggctcccagcaccgggggctcgtgag
cagaccctcagcgccaagcacaatccaccgcctaccaccccaatctcactggcatccgtg
ggaggagggctcccccctcaaaagacacccccagccaaccccccggctgcctccccggcc
tcggccccctccttcccccacgtctcctccaacctgcctcctccgccggccctgcgcccc
ctcaacaacgcagtggccgcctccagctccccagggatggtggggcaggccctgagcggc
cacctgccctcgccccacagcatggggcaggagaaggcaccggccctggccccctcccgc
tacccctacgccccaccgccactgccgccctccagctcctctgcccagtacccccagccc
tccccggggcagcccctgcccagctacagtgcttcctacgggcactccttccccccgccc
agcggcctctctgtctccagccagccccccaagtacacccagccctccctgccctcgcag
cccgtctggagccaggggccacccccttacagccgccccctgggcaatgctggctcccac
cccgctgcccctttccctggccagtccgcccatcaccagcagcctccccagcagcaccac
cacggtcacgggagcagcgggggcgtctccccagcagccacagcccctccacagcccccc
gggggctacccccacggcctggagtccagcagccatcacccttcccatcccacctacggg
ctgcgcctataccctccacacagccaggctgcctacagccaggctccctccgccactgcg
gccgctgccccctcctcctcctcctcctcctcctcctcctcctcctcgtcctcatcctct
tcttcttcctcatcctcctctgccgcctcttcccagggaagctaccccagcatgtgcacg
cacccaccagggcagagtcctgccacctacaccttccccccaccaccacccccttcccct
gctcatggggctggccctccagtcacctcagctgcaaccaccctctccaccgtcattgcc
accatggcctccccctctgcagccccctacaagacggcctcgcccccagtacccccatca
gctgtggccccatatgggaagcgggcagcctcccctgtccccaccttccagcccccggcc
ccctacaagccgggctcaccccccacttcctcggctgcccctttccgtgcagccacccct
cctggctaccgcgtggcctcctcccctgtggcggggggctacaaagccccctcgcctgcc
ccctctgccccgccacccttgccagggagcatggctgccccggccccgccgccgccccag
ctccccctcagcgctgctcagatcaagcaggagccgtcggaggagtacgagcccccggag
agccccgtgccgcctgcccgcagtccctcgccaccccccaaggtggtggatgtgccgagc
catgccagccagtcagccagattcaacaaacacctggaccgtggcttcaactcctgctcc
cgcacagacctgtactttgtgccccttgatggctccaagctggccaagaaaagagcagac
ttggtggagaaagtgcgtcgagaagctgagcagaaggcccgtgaagagaaggagcgggaa
cgggaacgggagcgggagaaggagcgggagcgggagaaggagcgggagctggagaggagt
gtgaagatggcccaggagggccgtccggtcgagtgctcgtccctcgggccggttccccac
cgcccctccttcgagcagggcagtgctgtcgcgactgttcccccgtacctgggccctgac
acgccagctctgcgcaccctgagcgagtacgcccggccccacgtcatgtcccccagcaac
cgcaaccaccctttctacgtgcccctgggcgccgtcgacccgggcctgctgggctacaac
gtgccagccatctacagcagcgatccggccacgcgggagcgcgagctgcgggagcgggag
gcccgcgaacgagacctgagggaccgggacctgcgtgaacgcctcaagcctggctttgaa
gtcaaaccggccgagttggagcagctccatgccgtgccagctgctgccatggatccgttc
ccccgccacggcgggctgagtctgcagacggcccccggccttcatcccgcttttcccttc
cacccagggctgggccacttggagcgggagaggctggcgctggcagccggcccgaccctt
cgtcccgacatgtcctacgccgagcgcttggcggctgaacgccagcacgccgagcgggtg
gccgctctcagcaatgaccctctggcccggctgcagatgctcaatgtgacacctcatcac
catcagcattcccacatccactcccacctccatctccaccagcaggatgccatacacgca
gcctcagcctccgttcaccctctgatcgaccccctcgcctcgggatcacacctcacccgg
ataccatacccggctggaaccatccccaaccctctcctgcctcaccctctacatgagaat
gaagtgctgcgccaccagctctttgccgcaccctacagggacctgccgggctccctctct
gcgcccatgtcggcggcgcaccagctgcaggccatgcacgcgcagtcggctgagctgcag
cgcctggctctggagcagcagcagtggctccacgcccaccaccccctgcacggcgtgccg
ctccccacgcaggaggactactacagccacctgaagaaggaaagtgacaaacccctttaa
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