Lonchura striata (white-rumped munia): 110481475
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Entry
110481475 CDS
T05897
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110481475 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110481475 (SMCR8)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
110481475 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
110481475
NCBI-ProteinID:
XP_021405784
UniProt:
A0A218UWI4
LinkDB
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Position
14:11666497..11672338
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AA seq
932 aa
AA seq
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MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFSGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPDCALDRADVGSDQNPTASDPTELGETHLY
THVPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQSVTNFLFEDVSVLDEKPPEKQYRGCQGLGQDAIDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQETEDSEEPKMSESVISEHQENLDYLDADIKGSISSGESIEVLGTE
KSGSGLTKSESQASLPVIPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYADDDEGGLRFTPRANPGVDDGQDDISKEESLVQVDAACCIGKESPNFLEALP
ELGQKPCEEDGVVRIPPQPYRPAEQGLRGGFPSHHGLPGGLLPCELDSRYLTGSREVSKS
SLDECSDSTSHISSAASTCSDRTPSPAHPACAAGERHRKRAGQNALRFIRQYPFAHPAIY
SLLSGRTLVVLGEDEAMVKRLVTALSIFVPNCGAYAKPVKHWVTSALHLVDFQKWKLIGL
QRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVARLADHRTQIKRGSTYYM
HVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVVNRRMNFLKHQLGLANEDIKIVQYL
AELLKLHYIQEPGQGGNPLLRFDYVPSFLYKI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttctccggccag
ggcgccaacccctgggccaaggtcgccggctccaagttcacccgggacttcatcctcatc
tccgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgcggatcatgtctgtggattaccag
gcatccttcgtggggcaccctcccggctctgcctacccgaagctgaacttcgtggaggat
tccaaggtggtgctgggggactccaaggaaggggcctttgcctacgtgcaccacttgacc
ctgtatgacctggaagccaggggctttgtgaggcccttctgcatggcctatatttctgct
gatgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctccaaagcctcc
gaatgcctgaagacggggaaccggaaagcttttgccaacgaactggaaaagaaactaaaa
gaccttgactacaccaggaccgtcctgcacaacgagactgagcaacagaagaaagccaac
gacaaggggtattacacgacccaggccattgagaaggccaatgagctggccagtgtggaa
aagtcaatcatcgagcaccaagacctgctgaggcaaatccggtcgtatccctacaggaaa
ctgaaggactctgaattccacccctacgagccagactgtgccctggaccgggctgacgtg
ggcagcgatcagaaccccactgcctctgaccccactgaactcggagaaactcacctttac
acccacgtgccatcctacacccccaaactcatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaagaactctgtgatgtttattttttcacccagacacttgac
cagttgcaccatatcgagaggacttttcggggggatgtttgttacctcctgacagagcag
atcagccgggctctcctaaagcaacagagtgtcaccaacttcctctttgaggatgtgtct
gtcctagatgaaaaacctcctgaaaaacagtacagaggttgccaggggctcggccaagat
gccatagatgaaaagtgttcagaagagtcccttgctcccaaagtggtcatcagcctgggc
tcctacaagtccagtgtggagtgtgtgcccatcaagatggagcaggaaacggaagactct
gaagagcccaaaatgtctgagtctgtgatatctgagcaccaggagaacctggactatctg
gatgcagatatcaaaggcagcatcagtagcggggagagcatcgaggtgctggggacggag
aagtcgggatctgggctgacaaaatcagagagccaggccagcctgcccgtcattcccagc
ccccaggcgggccgcagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatcccggaggacttcaaagcgagctaccca
agtgccattaacgaggagccctacgccgatgatgatgagggaggccttcgcttcaccccc
agagcgaacccgggcgtggatgatgggcaggacgacatctcaaaggaagaaagcttagtg
caggtggatgctgcgtgctgtatcgggaaggagagtcccaacttcctggaggccctgccc
gagctggggcagaagccgtgcgaggaggacggcgtggtgcggatccccccgcagccgtac
cggccggccgagcaggggctgcgcgggggcttcccctcccaccacggcctcccagggggg
ctcctgccctgcgagctcgactcgcgctacctgacgggcagcagggaggtgagtaagagc
agcctggacgagtgctcggactccaccagccacatcagcagcgccgcctccacgtgctcc
gacaggaccccgtccccagcccacccggcctgcgcggccggggagaggcacaggaagaga
gccgggcagaacgcgctgcgcttcatccgccagtacccctttgcccaccccgccatctac
tccctgctcagcgggaggaccctggtcgtgctgggggaggacgaggccatggtcaagagg
ctggtgacggcgctctccatcttcgtgcccaactgcggcgcatacgccaagcccgtgaag
cactgggtcacctccgctctgcacttggtggatttccagaagtggaagttgattggactc
cagagggcagtgtcccctgccggggtgaacgtgctgcacgccctgagccggtacagccgc
tacctgagcatcctggacgccgacagcaagaccctgcgctgccccctctacaagggcacc
gtggtggcccggctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatg
cacgtccaaagcatcctcacccagctgtgttctaaagccttcctcttcaccttctgccat
catttgcaccttcccatcagcgaaagggaaccggaggaatccgttgtgaatcgcaggatg
aacttcctaaagcatcaactgggccttgcaaatgaagatatcaaaatcgtgcagtacttg
gccgagctgctgaagctgcactacattcaggaaccggggcaaggggggaaccccctgctc
agatttgactatgttcccagctttttgtacaaaatctag
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