Lonchura striata (white-rumped munia): 110482721
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Entry
110482721 CDS
T05897
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
lsr04510
Focal adhesion
lsr04540
Gap junction
lsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110482721 (PDGFRB)
04020 Calcium signaling pathway
110482721 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110482721 (PDGFRB)
04540 Gap junction
110482721 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110482721 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110482721 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lsr04090
]
110482721 (PDGFRB)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110482721 (PDGFRB)
Protein kinases [BR:
lsr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
110482721 (PDGFRB)
CD molecules [BR:
lsr04090
]
Proteins
110482721 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
BACON_2
C2-set
Motif
Other DBs
NCBI-GeneID:
110482721
NCBI-ProteinID:
XP_021407855
UniProt:
A0A218V0Z9
LinkDB
All DBs
Position
13:complement(11789263..11811256)
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AA seq
1091 aa
AA seq
DB search
MLCPTLKTCLWLLILAGLPEVTFGDSRPHIEPKDTELVLSLHSTFSLLCYGDRELVWERE
GQPLAASLEHRDGVFVSNLTLRNVTGHHTGEYTCTYSPEQAPEPAERRALYIYVPDPSLV
FLPTSEEIFIFITGYTEVVIPCRVTNPQMEVTLYEKKVENPIPATYNPQQGFKGFFEDKT
YFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENVTVMCTVSGNELVNFNW
DYPRKQAGKAVEPVTDFLPGSIYEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKNIT
VQVIERGFVHFHTHLPSTIYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESSSEFTI
TSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKENGS
ASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGEPTRLLGNESAEIGVQTNASYHAER
QLYRVNSTLQLHRVHEPLLLRCTVHNFLGTSSQDITLVPHALPFKVVIISVILALLVLTV
ISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGRTL
GSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVN
LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTPKEDHVHS
HLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPERT
DRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFG
LARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE
LPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVDCY
RKRYQQVDEEFMKSDHPAVVRTRPTIPVLNNARLAASSPTSNTLYTAVHQNGGENDYIIP
LPDPKPEANCGLPQEASISRASSMLNEANTSSTISCDSPLGLQQDEEQESDPQPGCQEPT
TGHQEVEESFL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccactctcaagacgtgtctctggctcctcatcctcgctggtctgccagag
gtgacatttggggacagcaggccacacatcgaacccaaagacactgagcttgtcctcagc
ctccacagcaccttctccctcctgtgctatggggacagagagctggtctgggaacgcgag
gggcagcccctcgctgcctcgctggagcacagggacggtgtctttgtcagcaatctcacc
ctcaggaatgtgacaggccatcacaccggggagtacacgtgcacctacagccctgagcag
gcgcctgagccagcagagaggagagccctctacatctacgttccagatccctccctggtt
ttcctccccacctctgaagagatctttatcttcatcactggctacacagaggttgtcatc
ccatgtcgtgtgaccaacccacagatggaggtcactctctatgagaagaaggtggagaac
cccatcccagctacatataatccgcaacagggatttaaaggcttctttgaggataaaacc
tatttctgccggacatttgtggatgaccaggaggtggattcagacactttctatgtctac
aggatccaggtgtcgtctgtgaacgtctccatcagcgcagtgcagaccatggtgcgccag
ggagaaaacgtcaccgtcatgtgcaccgtgagcggcaacgagctggtcaacttcaactgg
gattatccccgcaagcaagcagggaaggctgtggagccagtgactgacttcctgcctgga
tccatttatgagatccgctccatcctcatcatccagaatgcagagctggaggacagtggg
acctatgtctgcaatgtgtccgagggctaccatgagaaaacggaccggaagaacatcact
gtccaagtgatcgagcgtggctttgtgcacttccacacccacctgcccagcacaatctat
gctgaggtccacaagagccacactatccaggtggaagtggaggcttatccccaacccagc
attgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttcaccatc
accagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgggtgaag
caggaagaaggaggattttacaccattcgagcttccaatgaggatgatgagcaggagctc
tccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaacggcagt
gccagcagtggggagcagactgtaacatgctctgctgaaggcatgccccagccagagatc
agctggtctacttgcagtgacatcaaatggtgcagcaccaagggagagcccacccggctg
ctggggaacgagtcggccgagatcggtgtgcagaccaacgcctcgtaccacgcggagcgg
cagctgtaccgcgtcaacagcaccctgcagctgcacagggtgcacgagcccctgctcctc
aggtgcaccgtgcacaacttcctgggcaccagctcccaggacatcactctggtcccacat
gccttgccattcaaggtggtcatcatttctgtcatcctggccttgctggtcctcactgtg
atctccctgatcatcctgattgtgctgtggcagaagaaacctcgttatgaaatccgctgg
aaggtgatcgagtcagtcagctctgatgggcacgagtacatctatgtggatcccatgcag
ctcccttatgactccacctgggaggtgcccagggacaagctggtgttaggacgcactctc
ggctctggtgcctttggtcgtgtggtggaggcaacagcccatggcctgagccattcacgg
tccaccatgaaagtggcagtcaaaatgctcaagtccacagcccgcagcagtgagaagcaa
gccctcatgtctgagctgaagatcatgagccacctgggacctcacctcaacattgtcaac
ttgctgggggcctgcaccaaaggaggacccatctacatcatcacggagtactgccgctac
ggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtcctacggggag
aaggcacggcgagaggcagagctctacgggaacacccccaaggaggaccacgtgcacagc
cacctctccatgtctgtcgagagtgacgggggctacatggacatgagcaaggacgactcc
ctggactatgtgcccatgtctgacatgaagggtgaagtcaagtacgctgacatcgagtcc
tctaactatggcactccctatgagctggacagctactccccctcagctcctgaaaggaca
gaccgggtgacactgataaatgagtctccactcctcagctacatggacttggtgggcttc
agcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcaccgtgac
ctggcagccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgactttggc
ctggcgagggacatcatgagggattccaactatatctccaaaggcagcaccttcttgcct
cttaagtggatggctccagagagcatcttcaacaacctctacactaccctgagtgatgtg
tggtcttttgggattcttctttgggagatattcacactaggagggactccataccctgag
ctgcctatgaatgagcagttctacaacgccatcaaacgtggctatcggatgtccaaaccc
acccatgcctctgatgagatctacaacatcatgcagaagtgctgggaggagaagtttgag
atcaggccatccttctcacagctggtggtgcttatgggaaacctcctggtggattgctac
aggaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgctgttgtc
cgcacaagacccacaattcctgtgctgaacaacgcccgccttgctgccagctcccccacc
agcaacaccctctacacagccgtgcaccagaacgggggcgagaatgattatatcatccct
cttcccgaccccaaacctgaggcaaactgtggcctccctcaggaggcctccatcagccgg
gccagctctatgctgaacgaggccaacacatcatctacaatatcctgtgacagccctctg
ggcctccagcaggacgaggagcaggaatctgacccacaaccaggctgccaggagccaact
acaggacaccaagaggtggaggagagtttcctgtag
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