Levilactobacillus suantsaii: H3M12_02975
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Entry
H3M12_02975 CDS
T06901
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsua
Levilactobacillus suantsaii
Brite
KEGG Orthology (KO) [BR:
lsua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsua03400
]
H3M12_02975 (addA)
Enzymes [BR:
lsua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3M12_02975 (addA)
DNA repair and recombination proteins [BR:
lsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H3M12_02975 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
ResIII
AAA_12
AAA_16
Gsf2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QMU08643
LinkDB
All DBs
Position
complement(622256..626074)
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AA seq
1272 aa
AA seq
DB search
MSAKFEFTPSQEQAIHQSGTNLLVSASAGSGKTRVLVQRVIERLKTGVGIDQFLIVTFTK
AAAAEMRDRIQAALRQELAATQGNSKQQQFYLTQLNRLPIADITTMDAFCMRLLQRYYYV
IDYDPVFRLQDETETALLRDDVWNDLREELYTAERTDDDQYQEGPFARLTANFSGDRRDD
GLAELVQNVYNVSDATPDPDEWVAQLPQTYQLDNDKLTASHFYQTQVRPVIVEQLTQVKA
DLTSFQQEAETSGFNDQADYVGYFLPALTKLIQAADEADWNDLRDQIRGFRWQNLEAKSK
NMPSVSKKDESYDQFDALKKRYYESAKARLAKLGKTYFLQPESGVRQTMHEAGELVSELA
KVVTAFRHAYLQEKLRRHVLDFADVEHAALEILTQDTAESKRVRTQLRDQYAEVMTDEYQ
DTNGLQEAILATIAQPAPHGNRFIVGDVKQSIYRFRQADPTLFVAKSDQYGADDSSGQLI
TLAENFRSMANIDHFTNLIFKQLMNRQLGEIDYTGDAELKFGATYYPDDVTSPAELLVYL
SDEPDQETDDNEAMDETFQVNDKAQGQVLMVGKKIQDLIAAQTPIYDRDAKTTRPMRYGD
ITLLTPTKTNNLIITDELRRLDIPVVVNDAQSYFKTTEIQIMMSLLKIIDNPYQDIPLAA
VLRSPIVGLNENELALLRINQRTGDYFQAVQHFHDTVNADRTGDMQAAVYQKIDRFLNQL
GEFRDIAQQNQLVTLIWRIYQETGFLDYVGGMPAGAQRQANLHALYERAQSYEHSSFKGL
FQFVRFVERLQDRDKDLANASVESNTNAVSVMTIHKSKGLEFPVVFLMDAAHHYNDKDQQ
GTAVLSGKTGIGIDYLDPATRIRTPSLPKLLGAQAIKRASIAEEMRKLYVALTRAESRLY
IVGTAASRDKALADWGQAFQSDDLVLPATLREKKNLATYMDWLGMCLLRTPQAQHLDLGL
EDHEALGALAGDPTQFAITFVTPADLAATEPQTVAPTDWYDQAQAAADQVTADQVDGAAL
TKLMTFQYPHQAATVTTAYQSVSEAKRLFEEPDTARMSAGQAPTSGGLRYVSHDFARPNF
MQTVRAPLPTDIGTATHLVLQQLDVTVLPTADRIQTLIDRLVQGKVLTAEVAQRLDPQAI
LQFYDSAVGQQILAHPDQLHREVPFSLLMPAKSLFRDFQEKESQVLVHGIVDGYLTTAEG
IVLFDYKTDHVNLENQAASVAKIVDKYSGQVNLYAAALHQITGQPVVHQYLYLLALGELV
AVPVKMIQGADD
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaaatttgagtttacaccgagtcaggaacaagcgattcaccagtcgggcacg
aacctgttggtctccgcgtcggcagggtccggaaagacccgggtcctggtccaacgggtg
attgaacggttaaagaccggagttggcatcgaccaatttttgattgtgacgtttaccaag
gcggcggccgccgaaatgcgtgaccggattcaggccgcgttacgccaagagttggctgcg
acccagggcaatagcaagcaacaacagttttacttaacgcaattgaatcgcttgccgatt
gcggacattaccacgatggatgccttctgtatgcgtctgcttcaacgctactactacgtc
attgattacgacccggtctttcgcctccaagacgagacggaaacggcgttattgcgcgac
gatgtctggaatgacttgcgtgaagagctttacaccgcggaacgcacagacgatgaccag
taccaagaggggccgtttgcccgcttgaccgccaacttttcgggcgaccgacgcgatgat
ggcttggccgaattggtccaaaatgtctataacgtgtcggatgctaccccggaccccgac
gaatgggtggcccagttaccacagacttaccagctcgacaacgataagctgactgccagt
cacttctatcaaactcaggtacggccggtcatcgttgagcaattgacgcaggttaaggcg
gatctcacgagttttcaacaagaagcggaaaccagtggcttcaatgatcaagccgactat
gtaggttactttctgcccgctttgacgaaattaattcaggcggctgacgaggctgactgg
aacgacttacgtgatcagattagaggctttcggtggcagaatttagaagcgaagtcgaaa
aatatgcctagcgtgtccaaaaaagatgaatcatatgatcaattcgacgctttgaagaaa
cggtattatgagtccgcgaaggcccgattagctaagctaggaaagacctatttcttgcaa
cccgaaagtggtgtgcggcaaactatgcacgaagccggcgagttggtcagtgaattggcc
aaagtcgtgacggcctttcggcacgcgtacttacaagaaaagcttcgccggcacgtgctg
gactttgccgacgtcgaacacgcggctttagaaattctgacgcaggacacagcagaatcc
aaacgggtccgcacacaattgcgggaccagtacgccgaagtcatgaccgacgagtatcag
gataccaatgggttacaggaagctattttggcaactatcgcccaaccggcaccccacggt
aaccggttcattgtgggcgacgtcaagcaatctatttatcgtttccgccaagcggacccc
acgttgtttgtggccaaatctgatcagtacggggcggatgacagttcggggcaacttatc
acgttagccgaaaactttcgctcgatggccaacatcgaccatttcaccaacttgattttt
aagcagttgatgaaccggcagttgggggaaatcgactacaccggggatgcagaattgaag
tttggcgcgacctattatccggacgacgtcaccagtccagccgaattgctggtctacttg
tctgatgagccggaccaagaaactgacgataacgaggccatggacgagacgttccaggtc
aatgataaggcccagggacaagttttgatggttggcaagaagattcaggacttgattgcg
gcccagacaccaatctatgaccgcgatgcaaagactacacggccgatgcgctacggtgac
attactctgttgacaccgactaagaccaacaacctcatcatcaccgatgagttacgtcgg
ttagacatccctgtggtggtcaacgatgcgcaaagctactttaagaccacggaaattcaa
atcatgatgtccctgttgaaaatcattgataacccgtatcaggatattcccctggctgcc
gtcttacggtcgcctatcgtggggttgaacgaaaacgagttggcgttgttacggatcaac
cagcggaccggggactacttccaggccgtccaacatttccacgacacggtcaatgctgat
cggacgggggacatgcaggcagcggtctatcaaaagattgaccgattcttaaatcagttg
ggcgaatttcgcgacatcgcccagcaaaaccaactggtgacgttgatctggcgaatctac
caggagactggcttcttggactatgtcggtgggatgccggccggcgcgcaacgccaggcc
aacctccacgccttgtacgagcgggcgcaaagttatgaacacagtagtttcaaaggcttg
ttccaattcgtgcggttcgtggaacggctccaggaccgtgacaaggatttggccaacgcg
agcgttgaaagcaataccaacgccgtgtcggtcatgaccatccataaaagtaaggggctt
gaattcccggtggtcttcttgatggatgccgcgcatcattataacgacaaggaccagcag
gggacggccgtgttgagtggtaaaacgggaatcgggattgattacttggatcccgcgact
cgtatccggacgcccagtctgccgaagctgttaggggcccaagccatcaagcgggccagc
atcgccgaagaaatgcggaaactgtacgtcgcgctaacccgggcagaatcccgtctctac
atcgtcgggacggcggcgagccgcgataaagcgctggctgattggggccaggcgtttcag
agtgacgacctggtgttacccgcgaccctgcgcgaaaaaaagaacttagccacttatatg
gattggttggggatgtgtctgctacgtacgccacaggcccaacacctcgacttaggcctt
gaggaccacgaggcgttaggtgccttagccggggaccccacgcagtttgcgattaccttc
gtgacgccggcggacttagcggcgacggaaccgcagacggtggccccaactgactggtac
gaccaggcacaagcggcggccgaccaggtcacggctgatcaagttgacggcgcagcgttg
accaagttgatgacattccagtacccgcaccaagcggcgacggtcactacggcttaccaa
tccgtgtcggaagccaagcgcctctttgaagaaccggacaccgcccggatgagtgcgggc
caggcgccaactagtggtggcttgcgatacgtcagccatgactttgcgcggccgaacttc
atgcagaccgttcgggcccccctcccgactgatatcgggacggcgacccacttggtttta
caacaactcgacgtcacggtcttgccgaccgccgaccggattcaaacgctgatcgaccgg
ttggtccaaggcaaggtgttgacggctgaagttgcccaaagattggacccccaagcgatt
ctccagttttatgatagcgcggtgggccaacagattttggcacatcccgaccaattgcac
cgtgaagtgccgttctcactgttgatgccggcgaagagcctcttccgcgattttcaggaa
aaggagtcgcaggtcctggtccacgggatcgtcgacgggtatttgaccacggctgagggc
atcgtgctcttcgactacaagaccgaccacgtgaacctcgagaatcaagcggccagcgtg
gctaaaatcgtcgataagtatagtggccaagtcaacctctacgctgcggccttgcaccag
atcaccggtcagcctgttgtgcaccagtatctctacttattagcgttaggcgaactggtt
gctgtcccggtcaagatgattcagggcgcggacgattaa
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