Levilactobacillus suantsaii: H3M12_08435
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Entry
H3M12_08435 CDS
T06901
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsua
Levilactobacillus suantsaii
Pathway
lsua03410
Base excision repair
lsua03430
Mismatch repair
lsua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3M12_08435 (recJ)
03430 Mismatch repair
H3M12_08435 (recJ)
03440 Homologous recombination
H3M12_08435 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsua03400
]
H3M12_08435 (recJ)
DNA repair and recombination proteins [BR:
lsua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H3M12_08435 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H3M12_08435 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H3M12_08435 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
NQRA_2nd
DUF6792
Motif
Other DBs
NCBI-ProteinID:
QMU07493
LinkDB
All DBs
Position
1823250..1825571
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AA seq
773 aa
AA seq
DB search
MITAQYHWNNHHVDQPTSAAQDLAHATRVSPIVAQILYNRGFKTAEAAQAFLHPGPEQLH
DALLLHDMQKGMDRIEQAVSDDQQITIYGDYDADGVTSTAIMYETLSTLGAKVNYYIPNR
FTDGYGPNVAAFKKLIAAGTQLFVTVDNGVAGNDAIAAANEAGVDVVVTDHHELPEKLPD
AYAIIHPRYPGAEYPFGGLSGAGVAFKVAQALRDEIPQDVLDLAAIGTVADLVPLVDENR
VLVYFGLALLRQDDRPGIQALLKTAGIDPATITEQSIGFGIAPRLNALGRMEDATPAVEL
LTTLDENVAQQLAQQTETENRKRQQLVADISTAALAQAADEHHQHRQALIISGHDWHEGV
LGIVASKVVEQTGKPTLVLNVAEDGHAKGSGRSVAAFNLFAALDGHRDLMTAFGGHHMAV
GLTVPADNLDALADALDAEAVAQDLAAQGPSDVTVAATLPVPEATMDLYHDLLQLAPFGT
DNPQPLFTFEPEAVTQVKAIGKTQDHLKFQLQTGTTRLNAIQFGAGDQAADLGAAQNVAV
LGTLEDNVWQGRHSLQVMVKDLQTTSPAVVTLRTTQLHQAMFQAPGTYLFFHDNVYRQLA
QQLPSDATAVLYTGQDLTPLAADQALYVVDCPDLTTDLTTALTQLKPTKITAYLYKKESL
SRLGMPSRAEYAKLFKFVTTHQHVDVSHQLAQLSTFIQIPRTQLVFMIQVFFECGFISIS
HGIMDAVAQPAHKDLTTAPSYQLRLQQMQTEQDLLFCPSAALTQRLQRLIDLK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggcccaataccattggaataatcaccacgtcgaccaacccacgtcggcggcc
caggacctggcccacgcgacccgggtctcaccaattgtggcacaaatcttatataaccgg
gggttcaagacggcggaggcggcccaagcgtttctccatcctggaccggaacaactgcac
gatgcgttgctgctccatgatatgcaaaaggggatggaccgcatcgagcaggccgtttct
gacgaccagcagattaccatctacggagattacgatgccgatggggtcaccagtacggcc
atcatgtatgagaccttaagcacattaggtgccaaggtgaactattatattcctaaccgg
ttcacagacggttatggtcccaacgtggcggcgttcaagaagttgattgccgcagggacg
caactcttcgtaacggtggacaacggggtcgcgggtaacgacgcgattgcggcggctaac
gaggccggcgtagacgtagtggtgaccgaccatcacgagttgccagagaagttaccggat
gcttacgccattattcatccccgttatccgggagctgaatacccctttggcggcctatcg
ggagccggggtggcctttaaggtcgctcaagctttacgcgacgagattccgcaagacgtc
ctggatttggccgctatcggtacggtcgccgacttggtcccgctagtcgacgaaaatcgg
gtcttggtctactttggtctggccctgttacgccaagacgaccggccggggattcaagcc
ttgttgaaaacggcgggaattgatccggcgacgattacggaacagtcgattggttttggc
atcgccccgcgcctaaacgctttggggcggatggaggatgcgacccccgctgtggaactg
ctcacaacgttagacgaaaacgtggctcaacagttagcccaacagaccgagactgagaac
cgtaaacgccaacagttagtggctgacattagtaccgcggccctggcccaagcggcagat
gagcaccatcagcatcggcaggccttgattatcagcggtcacgactggcacgaaggggtg
ttgggaatcgtggctagtaaggtcgtcgaacaaaccggcaagccgacgttggtgttaaac
gtcgcggaagatggtcatgccaagggatccggccgaagtgtggccgcgtttaacctcttt
gcggcgttagacggccatcgtgacctgatgacggcctttgggggtcatcacatggccgtg
ggcttaacggtcccagcggacaatctagacgcgctggcagacgccttagatgccgaagcc
gtggctcaagatttagccgcccaaggaccgagcgatgtcaccgtggcggccacgttaccc
gttccagaagccacgatggatttgtaccatgatttgctccagttggccccattcgggacg
gataacccgcaaccactgtttacctttgaaccggaagcggtgacccaggtcaaagccatt
ggtaagacccaggaccacttgaaattccagttgcagacgggaacgacccggttaaatgcc
attcaatttggggcgggggaccaagcggccgacttaggcgccgcacaaaacgtagccgta
ttaggaactttggaagataacgtgtggcaggggcggcactcccttcaggtcatggtcaaa
gatttgcagaccacgtcccccgcggtcgtgacgttacggacgacccaactccatcaagcc
atgttccaagccccagggacctacctattctttcacgataacgtttatcggcaactggcc
caacaattaccctcagatgctacagcggtgttgtacacgggccaagacttaaccccgtta
gcagccgaccaagcgctgtacgtggtggattgtccggatctgactaccgatttgacgacg
gccttgacccagttgaaaccgactaaaatcacggcttatttatacaagaaagaaagtctt
tcacgtttaggcatgccatcacgcgctgagtatgctaaactatttaagttcgttacaaca
caccaacacgtagacgtgagtcatcaattggcgcaacttagcacgtttatccaaattccg
cggacacagttagtctttatgattcaggtcttctttgaatgtgggttcatttccattagc
catggcatcatggatgcggtggcccaaccggcccacaaggatttgacgacggccccgagt
tatcaattacggttgcagcagatgcagaccgaacaagacttactattttgtccctcagcg
gcgttaacgcagcgtctccagagacttatcgacttaaaataa
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integrated database retrieval system
