Levilactobacillus suantsaii: H3M12_09000
Help
Entry
H3M12_09000 CDS
T06901
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsua
Levilactobacillus suantsaii
Pathway
lsua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3M12_09000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsua03019
]
H3M12_09000
03400 DNA repair and recombination proteins [BR:
lsua03400
]
H3M12_09000
Enzymes [BR:
lsua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3M12_09000
Messenger RNA biogenesis [BR:
lsua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3M12_09000
DNA repair and recombination proteins [BR:
lsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3M12_09000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMU07598
LinkDB
All DBs
Position
1940783..1942216
Genome browser
AA seq
477 aa
AA seq
DB search
MMESLTASLKRGFGHTTFREGQQAALTALEQHQDTLAVLPTGAGKTLIYQLYGYRHAGCV
LIVSPLLALMTDQVNRMRVAGFRRVAAITSLTSYAERQVILAHFADYQFLFLSPEMLAQP
TMLAQVQQLRLSLLVIDEAHCIVQWGPDFRPEYLLLGAIRERLARPLTLMLTATADSATQ
HEIAKQLRTTPQIITESIDRPSIFLDVEAVANDAEKRERLLQLVSQLVFPGVVYFSSKQL
ASDMAQWLQEQTGLPIAAYHAGLSSEDRFKIQQQFMAGELAVICATSAFGMGIDKNDIRY
VIHYHLPTDLGSYAQEMGRAGRDGQQSLAVLLSAPGDERLPLTLMEANRPDDTTIQRFYA
HPQAFDSDDPGIALLTFYYQHGISLAAVQTLFTRREQERHHALAQMLAYAREPDCLRDRW
LTAFGQADSTHTAKCCAPAKVPLDLAALGLKRTVQPAVNPVTLDWRARLETLFLSNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatcattgacggcgagtttgaaacgtggcttcgggcacacaacctttcgtgaa
ggacaacaagccgccctgacggcacttgaacaacaccaggataccttggccgttcttccg
actggagccggtaaaaccttaatttatcagctctacgggtaccggcatgctggttgcgtc
cttatcgtgtcaccgttgttagcgttgatgaccgaccaagtcaaccggatgcgcgtggcc
gggtttcgccgggtcgcagccattacgtcgttgaccagttacgcggaacgccaggtgatt
ttggcccacttcgcggactatcagttcttattcttgtcgccagagatgttagctcagccc
acgatgttggcgcaagtccaacaactgcggctcagtttgctagtgatcgacgaggcccac
tgcatcgtccagtggggaccggattttcggccagaatacttattgttgggggcaatccgg
gaaagattggcacgaccgttgacgttgatgttaacagccacggccgattctgccacccaa
cacgaaatcgccaaacagttgcgcacaacgccgcagatcatcacggaatccattgaccgg
ccaagcatcttcctcgatgtggaggcggtcgctaacgatgctgagaagcgggagcgcctc
ttacaattggtctctcagttagtttttccgggagtggtctacttctcaagcaaacaactg
gccagcgacatggcccaatggttacaggaacaaacggggttaccgattgctgcttatcat
gcgggtttgtccagcgaggatcgctttaagattcaacaacagtttatggcaggcgaattg
gcagtgatctgtgcgaccagtgcgtttgggatggggatcgataagaacgatattcgctac
gtgatccattaccacttgcccactgatttagggagttacgcccaagaaatgggccgagct
ggccgggatgggcaacagagcttggccgtgttattgtcggcgccgggagatgaacgcttg
ccactgaccttgatggaggccaaccggcccgatgacacgaccatacagcggttttacgcc
catccgcaggctttcgattccgatgatccgggcatcgctctgttgacgttttactatcaa
catgggatttcgctggcagcggtgcagacgttatttacccgtcgtgagcaagaacggcat
cacgcactggcccaaatgctggcgtatgcccgtgaaccagattgtttgcgtgaccgctgg
ttaacggcatttggacaggcggactcgacacacacggcgaagtgttgtgccccggctaag
gtcccattagacttagctgcccttggcttaaaacggacggttcaaccggcggtaaacccc
gtcacactggactggcgcgcccgtttagaaacgctatttttatcgaataattaa
DBGET
integrated database retrieval system
