KEGG   Lactuca sativa (garden lettuce): 111877946
Entry
111877946         CDS       T05352                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111877946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111877946
Enzymes [BR:lsv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     111877946
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     111877946
 Prokaryotic type
     111877946
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 111877946
NCBI-ProteinID: XP_023730218
LinkDB
Position
4:125466505..125467818
AA seq 295 aa
MRKQKERKRKPTELKCSPAKLLKSGTVNNLTVNDPYPNHPRPSSEECRAVRDDLLAFHGF
PQQFVKYREQRLKLLPNEDEYGSTTSPQAELVVSSKESVLDGLVSIILSQNTTDANSQRA
FSSLKSAFPTWEDVLAADSKCIEDAIRCGGLAPTKASCIKNMLNCLHEKRGKLCLEYLHD
LSIDEIKTELSQFKGIGPKTVACVLMFNLQQDDFPVDTHIFQIAKAIGWVPLDADTKRTY
LHLNTRIPNELKFDLNCLLFTHGKACKSCTKKEGNQQKKETTTSSCPLLNYLRKK
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcggaaacagaaagagcgtaagaggaagccgacggaactcaaatgctcgccggcgaag
ttactcaaaagtggcaccgttaacaatctcacagtcaacgacccctaccccaaccaccct
cgcccctcatctgaagaatgccgagccgttcgagacgacctcttagccttccatggattc
ccccaacagttcgtcaaataccgcgaacaaaggttgaagcttcttcccaacgaggatgaa
tatggatccacgacgtcaccgcaggcggaactggtggtttcttcgaaggaaagtgttttg
gacgggctagtgagcattatattgtcacaaaatactactgatgcgaactctcaaagggcc
ttttcttcactcaaatctgctttcccaacatgggaggatgttcttgctgctgattcaaag
tgtattgaggatgctataagatgtggaggattagccccaacaaaagcttcttgtattaag
aatatgctgaattgcttgcacgagaagagagggaaactatgcttggaatacctgcacgat
ttgtcaattgatgaaataaagacagaactctctcaattcaaagggattggacctaaaacg
gtggcatgtgtattgatgtttaatcttcagcaagacgatttccctgtagatacacatatc
tttcagattgcaaaggcgattggttgggttcccttagatgcagacactaaaaggacatat
cttcatctcaatacaagaataccaaatgaactgaaatttgacctaaattgtctcttgttc
acacatggtaaagcctgcaaatcatgcacaaagaaagaaggtaaccagcaaaagaaggaa
actacaactagctcatgtcctttacttaactacttaagaaaaaagtaa

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