Lactuca sativa (garden lettuce): 111882147
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Entry
111882147 CDS
T05352
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03420
Nucleotide excision repair
lsv04120
Ubiquitin mediated proteolysis
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111882147
04120 Ubiquitin mediated proteolysis
111882147
09124 Replication and repair
03420 Nucleotide excision repair
111882147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111882147
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111882147
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
111882147
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111882147
Multi subunit type E3
SCF complex
Ring finger protein
111882147
Cul2 complex
111882147
Cul3 complex
111882147
Cul4 complex
111882147
Cul7 complex
111882147
Cul8 complex
111882147
Cul9 complex
111882147
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111882147
TCR (transcription coupled repair) factors
Cul4-CSA complex
111882147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
111882147
NCBI-ProteinID:
XP_023734279
LinkDB
All DBs
Position
1:complement(46051808..46053234)
Genome browser
AA seq
115 aa
AA seq
DB search
MDSDVTMVPAGEGSSFPGPSSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLC
IECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgtgacgatggtacccgccggtgaaggatctagttttccaggaccttct
tcctcttcaaagaaaccaaagcgtttcgaaatcaagaagtggaatgccgtctctctctgg
gcttgggatattgtggttgataattgcgcgatctgcagaaatcacatcatggatctgtgt
atcgaatgccaagctaatcaggcaagcgccaccagcgaggagtgtactgttgcttggggt
gtctgcaaccatgcttttcactttcactgcattagccgctggctcaagactcgtcaagtg
tgccctcttgacaacagtgagtgggagttccagaaatatggtcattag
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