Lactuca sativa (garden lettuce): 111882531
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Entry
111882531 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111882531
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111882531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111882531
03041 Spliceosome [BR:
lsv03041
]
111882531
03032 DNA replication proteins [BR:
lsv03032
]
111882531
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111882531
Spliceosome [BR:
lsv03041
]
Complex A
U1 snRNP components
Sm proteins
111882531
U2 snRNP components
111882531
Complex B
U1 snRNP components
111882531
U4/U6.U5 tri-snRNP components
111882531
Complex C
U2 snRNP components
111882531
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111882531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111882531
NCBI-ProteinID:
XP_052624618
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All DBs
Position
2:208421964..208424165
Genome browser
AA seq
279 aa
AA seq
DB search
MSMSKGSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPDENRAKAVGAAALAGPGLGRAAGRGIPTAP
LIQAQPGLAGPVRGIGGPAPGMMQPQISRPPVPNMSAPPMNYPQAPVIRPGQMPYPGQGP
PPQMPRGPPPQMPPQFAQRPPGQYQVPPPGQYGQRPMAPPPQMMRGPPPPGGAPRPGMPG
PPPPARPGMPPPGGQIPVFGPPRPGMPPPPNSQQQHQQQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagggttcgaagatgctgcaattcataaattaccgtatgcgggtcaca
atccaagacggccgtcagctagttggtaagttcatggccttcgaccgccacatgaatctc
gtcattggagattgtgaggagttccgtaagctcccccctgcaaaaggtgctaaaaagaat
gaagaacgcgaggacaggcggactcttggtctcgttcttttaaggggcgaagaggtgatt
tccatgactgttgaaggccctccgccacctgatgagaaccgtgccaaggctgttggagcg
gctgcgttggccggtcccggtcttggtcgtgctgctggccgtggaatcccaactgcgcct
ttgattcaagctcaaccgggtttagctggaccggttaggggaattggtggaccggctcca
ggcatgatgcagccgcagatttctcgacctcctgttccgaatatgtctgctccgccgatg
aactacccacaggctcctgtgattcgacctggacagatgccgtaccccggacagggtcct
ccgcctcagatgccacgcggaccacctccacagatgccgcctcagtttgctcaacggcct
cctggtcaatatcaggtgcctccccccggtcaatatgggcagaggcctatggctccccct
ccccagatgatgaggggtccaccaccacctgggggcgctccacgtcccggtatgcctggt
ccgcctccacctgctcggcctggtatgcctcctcctggtgggcagattcctgtatttggg
cctcctcgtcctggtatgcctcctccgccaaactctcagcagcaacatcagcagcaatga
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