KEGG   Lactuca sativa (garden lettuce): 111883604
Entry
111883604         CDS       T05352                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3
  KO
K07936  GTP-binding nuclear protein Ran
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03008  Ribosome biogenesis in eukaryotes
lsv03013  Nucleocytoplasmic transport
lsv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111883604
   03008 Ribosome biogenesis in eukaryotes
    111883604
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111883604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111883604
   03009 Ribosome biogenesis [BR:lsv03009]
    111883604
   03016 Transfer RNA biogenesis [BR:lsv03016]
    111883604
   03036 Chromosome and associated proteins [BR:lsv03036]
    111883604
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111883604
   04031 GTP-binding proteins [BR:lsv04031]
    111883604
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     111883604
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    111883604
  Pre-60S particles
    111883604
Transfer RNA biogenesis [BR:lsv03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    111883604
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     111883604
   Spindle formation proteins
    111883604
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111883604
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    111883604
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 111883604
NCBI-ProteinID: XP_023735703
LinkDB
Position
8:87001368..87003792
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV
ESPALAPPEVQIDLLAQQQHEAELAQAANQPLPDDDDDAFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctctaccaaatcaacaaacggttgattatccaagctttaagctggtgattgttggt
gatggaggaaccgggaagactacatttgtcaagagacatctaactggtgaattcgagaag
aagtatgaacctactattggagtggaagttcacccactggatttcttcacaaactgtgga
aagattcgtttctattgctgggatactgcagggcaagagaagtttggtggtcttcgtgat
ggatactacatccatgggcaatgtgctattataatgtttgatgtcactgcaagactcact
tacaaaaatgtgcctacatggcatcgcgacctctgcagggtgtgtgagaatattccgatt
gtcctatgtggaaataaggtggatgtgaagaacagacaagttaaagcaaagcaagttaca
ttccataggaagaagaatttgcagtattatgaaatatctgctaaaagcaattacaacttt
gagaagccattcttgtaccttgccagaaagcttgctggggatgcaaaccttcattttgtg
gagtcacctgcccttgcccctccagaggtccaaattgatttgttggcccaacaacagcat
gaagcggagcttgctcaggcggccaaccaaccactgcctgatgatgatgatgatgcattt
gattaa

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