KEGG   Lactuca sativa (garden lettuce): 111884066
Entry
111884066         CDS       T05352                                 
Symbol
LOC111884066
Name
(RefSeq) josephin family protein
  KO
K11863  ataxin-3 [EC:3.4.22.-]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111884066 (LOC111884066)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsv01002]
    111884066 (LOC111884066)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111884066 (LOC111884066)
Peptidases and inhibitors [BR:lsv01002]
 Cysteine peptidases
  Family C86
   111884066 (LOC111884066)
Ubiquitin system [BR:lsv04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MJD
    111884066 (LOC111884066)
SSDB
Motif
Pfam: Josephin UIM UIM_2
Other DBs
NCBI-GeneID: 111884066
NCBI-ProteinID: XP_023736162
LinkDB
Position
8:complement(157383657..157387118)
AA seq 303 aa
MEGPINGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRTEHQMMLEGSAA
SGGDAFLSEESHNVSMDGDFSIQVLQKALEVWDLQVIPLHSPVAEPAQVDPELENAFICH
LQDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDTLKGFGWSIFLVRGNFPKECPI
TSGEASNGYGQWLLPEDAERITKSCNSGNRHQQHHRDPPTPVAVEDDDLNAAIAASLREN
SGGGGEVGISGNDDDDLEAAIAASLAVNNVAPPSPVTLAVPAAAAGCGGASESESKDSGL
QDK
NT seq 912 nt   +upstreamnt  +downstreamnt
atggaaggtccgatcaacggaggaatgttgtaccacgaggtacaagagtcgaaactgtgt
gccgtccattgcgtcaacacggtgttgcagggacctttcttctccgagttcgatttggct
gctctggcctctgatcttgatcggacggagcaccagatgatgttggaaggatccgccgct
tccggaggagatgctttcctgtcggaggagtcgcataatgtctctatggatggcgatttc
agtatccaggttctacaaaaagcattagaagtgtgggacctacaagtaatccccctccac
agtcccgtagccgaacccgcacaagtcgacccggaactcgaaaacgcgttcatctgccat
ctccaagaccactggttttgcataagaaaagtcaacggcgaatggtacaactttgactcc
ctatacgcagcccccgaacacctctcgaaattctatctttccgcttacctcgacacctta
aaaggcttcggatggagcattttcttagtccgtgggaacttccctaaggaatgtcccatc
acctctggtgaagcctctaacggctacggacagtggctgttgccggaagacgctgaaagg
attaccaaatcctgcaattccggcaaccgccaccaacaacaccaccgcgacccacccact
ccggtcgcggtggaagatgatgatttgaatgcggccattgccgctagtttgagggagaat
agcggcggtggtggtgaggttgggatctctgggaacgacgatgatgatttggaggctgcg
attgctgctagtttggcggtgaataatgttgcaccgccttcgccggtgacgttggctgtg
ccggcggcggcggctggttgtggaggtgcgtcggaaagcgaaagtaaggatagcgggtta
caagataagtga

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