Lactuca sativa (garden lettuce): 111887406
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Entry
111887406 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111887406
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03008
Ribosome biogenesis in eukaryotes
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111887406
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111887406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111887406
03009 Ribosome biogenesis [BR:
lsv03009
]
111887406
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111887406
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
111887406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
111887406
NCBI-ProteinID:
XP_023739345
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All DBs
Position
8:89395514..89396982
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AA seq
128 aa
AA seq
DB search
MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADA
EPLEILLHLPLLAEDKNVPYVFVPSKEALGRACGVTRAVIACSVTSNEGSQLRSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaagccgtcaatccaaaagcgtatccattggccgatgctcagcttacaata
acgatactggatctcgtccaacaagctgccaattacaaacaactcaagaaaggtgccaac
gaagctacaaagactctgaacagaggtatatcagagtttgtagtgatggcagctgatgct
gagcctcttgaaattcttcttcatcttccacttctggctgaagataagaatgtaccctat
gtttttgtcccctcaaaggaagcacttgggagagcatgtggagttactagagctgttatt
gcatgttcagtgacctctaatgaaggaagtcaattgagatcccaaatacagcagctcaag
gatgcaattgagaagctgttgatttaa
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