KEGG   Lactuca sativa (garden lettuce): 111892622
Entry
111892622         CDS       T05352                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
lsv04120  Ubiquitin mediated proteolysis
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111892622
   04120 Ubiquitin mediated proteolysis
    111892622
  09124 Replication and repair
   03420 Nucleotide excision repair
    111892622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111892622
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111892622
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     111892622
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   111892622
  Multi subunit type E3
   SCF complex
    Ring finger protein
     111892622
   Cul2 complex
     111892622
   Cul3 complex
     111892622
   Cul4 complex
     111892622
   Cul7 complex
     111892622
   Cul8 complex
     111892622
   Cul9 complex
     111892622
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111892622
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111892622
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 111892622
NCBI-ProteinID: XP_023744443
LinkDB
Position
5:complement(297568095..297571371)
AA seq 125 aa
MASLDTDVTMVPAGEGSGGAGPSSSTASTSSSTKKAKRFEIKKWNAVSLWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcttctctagacaccgatgtcaccatggttccggctggcgagggttcaggcggagcc
ggaccttcttcttcaaccgcctccacttcttcgtcaaccaagaaagctaagcgatttgag
atcaaaaagtggaacgctgtttctctatgggcttgggatatcgtcgtggataattgcgcg
atatgtaggaatcatatcatggatctctgcattgaatgtcaggctaatcaagccagtgct
accagtgaggaatgcacagttgcttggggtgtctgcaatcatgccttccactttcactgt
attagcagatggctcaaaactcgtcaagtctgcccattagataacagtgaatgggaattc
cagaagtatggtcattag

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