Lactuca sativa (garden lettuce): 111904227
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Entry
111904227 CDS
T05352
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111904227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111904227
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111904227
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
111904227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
111904227
NCBI-ProteinID:
XP_023755775
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All DBs
Position
7:153300875..153304148
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AA seq
620 aa
AA seq
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MAKSEQSSSSSSSSMVDSAPRPWESYNTVYTNAKAGMEGVDKEKVQRIVYEMSKGSKYFE
NEERKEAYMKQKIENMRNHLANLKATDISHYQRVADKRIAELDTTRDLSRIWLHVDMDAF
YAAVETLSNPSLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIASKLCPDLIFVPTDF
KKYTYYSDLTRKVYHEYDPNFTAASLDEAYLDITKVCKERDLSGGEVAEELRENVYKATG
LTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRVAIMTFISSLPIRKIGGIGKVTETILK
DVFEIKTCEDLLQKSSLLFALFSPSSAEFFVSVGLGLGGTEAPNVRSRKSMSNERTFSAT
KDEAFFNQKLVELSEMLSADMEKEDLHGKTLTLKLKTASFEVRTRAMTLQSYIRSSKDIL
KHASKLLKAELPVSLRLIGLRMSHFNEDKGGSGVSDPTQRTLLNFIKSGESNKETVVDEE
NSDPCFEHFSEIDDQNICSLNDDHENLQVIETCCSDNNNETGPSSSSSLMWLDDYKCLVC
GIELPPSFVEERQEHSDFHLAQKLQQEEESEQTYKNLSFKHRMMSQKDGGVEKGKGKKKQ
KHAVTNGDHIPIDAFFTKRS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatccgaacaatcatcatcatcatcatcatcttcgatggtagattcagctccg
cggccatgggagtcttataacactgtttatactaacgccaaagcaggtatggaaggagtc
gataaggaaaaagtgcaaagaatagtgtatgaaatgagcaaaggttcaaagtattttgag
aatgaagaaagaaaagaagcttatatgaaacagaagatcgagaacatgcgtaatcatctt
gcaaatctaaaagctactgatatatctcattatcagagggttgctgataaacggattgca
gaattagatactacacgtgatctgtcaagaatctggttgcatgtagacatggatgctttt
tatgcagctgttgagaccttaagcaacccttcattaaaaggaaaaccaatggctgttggc
agcatgtccatgatctctacagctaattacgaggcacgaaagtttggtgttcgagctgca
atgcctggtttcattgcaagtaaattatgtccagacttgatatttgtgcctacagatttc
aagaaatacacatattacagtgacttaactagaaaagtctatcatgaatatgatccaaat
ttcactgctgcaagtcttgatgaagcatacttagatatcacaaaagtctgcaaggaaagg
gatttatcaggtggagaagttgctgaagagcttagagaaaatgtgtataaagctactgga
ttaacatgtagtgctggagttgctccaaatcggttacttgcaaaagtttgctcagatata
aacaaaccaaacgggcagtttgttttacctaatgatcgggttgctataatgacatttata
tcctcacttcctatacgaaagattgggggaattggtaaagtgacagaaactatcttaaaa
gatgtatttgagatcaagacatgtgaagatttgttgcagaaaagctccttactttttgca
ctattctctccttcatctgcagagttttttgtgtctgtagggttaggacttgggggaaca
gaagcaccgaatgttagatcacgaaaaagtatgagcaatgagagaacattttctgcaact
aaagacgaggccttttttaatcagaaattagttgaactttcggagatgctttctgctgac
atggagaaagaagatctacatggaaagacactgacactcaaactaaaaaccgcatcattt
gaggtgagaactcgagcgatgactttgcaaagttatataaggtcaagtaaagatatactg
aaacatgcttcaaagcttctcaaggctgaacttcctgtatcacttagattaatcggatta
cgtatgtctcatttcaatgaagataaaggtggtagtggtgtatctgatcctacacaaaga
actcttttgaattttataaaatctggagaatctaacaaggaaactgtagttgatgaagag
aattcagatccatgttttgagcatttttctgaaattgatgatcagaatatttgcagttta
aatgatgatcatgagaatttacaagttatagaaacatgttgttcagataataataatgaa
acagggccttcatcatcatcatcattgatgtggttggatgattataagtgtttggtatgt
gggattgaattgcctccaagttttgtggaagaaagacaagagcattctgattttcatctt
gctcaaaaacttcaacaagaagaagaatcagaacaaacttacaaaaatctttcattcaaa
cataggatgatgagtcagaaagatggtggtgttgagaaaggaaaaggaaagaagaagcaa
aaacatgctgttacaaatggtgaccatattcccattgatgcattttttacaaaaaggagt
tag
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