Lactuca sativa (garden lettuce): 111904794
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Entry
111904794 CDS
T05352
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111904794
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsv01007
]
111904794
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111904794
Enzymes [BR:
lsv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111904794
Amino acid related enzymes [BR:
lsv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111904794
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111904794
Prokaryotic type
Other AARSs
111904794
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111904794
NCBI-ProteinID:
XP_023756282
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All DBs
Position
5:192721015..192728977
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AA seq
1176 aa
AA seq
DB search
MDDVSEGKDFSFPKQEEKILEWWTEVKAFETQLEKTKDLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEHEIDVKLGIKTREDVIKMGIGNYNEE
CRSIVTRYVGEWEKVITRTGRWIDFKNDYKTMDLNFMESVWWVFSQLFKKNLVYRGFKVM
PYSTGCKTPLSNFEANSNYKEVPDPEIMVTFPIIDDQEGAAFVAWTTTPWTLPSNLALCV
NSNLVYVKVKSKSNGKIYVVAESRLSELPVEKAKKGTPNGAVDDKSKGKTKSSVVAYEVL
DKFPGSSLVGKKYVPLFDYFKEFSDVAFRVVADDYVTSDSGTGIVHCAPAFGEDDYRVCL
ENQIINKGENLVMAVDDDGCFTERITDFSGRYVKEADKDIIQAVKDKGRLVKTGSFTHSY
PFCWRSDTPLIYRAVPSWFVAVEKLKDQLLENNEKTKWVPAFVKEKRFHNWLENARDWAI
SRSRFWGTPLPIWISEDGVDIEVIGSVEELEKRSGVKVTDLHRHKIDHITIPSPRGEKFG
VLHRVEDVFDCWFESGSMPYAYIHYPFENEEFFQKNFPGHFVAEGLDQTRGWFYTLMVLS
TALFEKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEVIDDYGADALRLYIINSPVVRA
EPLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGLPPLVPHDPAILLNSANVLDQ
WINSATQSLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGEEDCRIA
LSTLYHVLLTSCKAMAPFTPFFTEVLYRNLRKVSNGSEESIHFCSFPQVEGKGGSRIEQS
VNRMMTIIDLARNIRERHNKPLKTPLREMIVVHPDAEFLNDIAGKLKEYVLEELNVKSVV
PCNDPLLYASLRAEPDFSVLGKRLGKSMRVVAEAVKAMSQEEILAFEKSGEITIATHCLK
LSDIKIVRGFKRPDGVSEDQMDASGDGDVLVILDLRPDDSLFEAGFAREVVNRIQKLRKK
SALEPTDIVEVYFKSLDEDKSVTAQILKSQEAYIKEAIGSPLLDSTLTPEHAVMIAEETY
HNISNCNFQITLSRPALAFNNKAILDLYSGNAKHAEALKVYLLSRDHFNLKTEFLVGINQ
IKVDCIENQPDVDVVLGEHVFLTVGDYYSQTTNNNS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtatccgaaggcaaagatttctcgttcccaaaacaagaagagaagatctta
gaatggtggactgaagtcaaagcatttgaaacgcagcttgaaaaaaccaaagacctaccg
gaatacatcttctacgatggacctccgtttgccactggtttacctcactacggtcacatc
cttgctggaacaatcaaggacatcgtcacacggtaccagaccatgactggccaccacgtc
acacggcggttcggttgggactgccatgggttgccggtggagcatgagattgacgtcaag
ctagggattaagaccagagaggatgtgattaagatggggattggtaattacaatgaggaa
tgtaggagtattgttactcggtacgttggggaatgggagaaggtaattacgaggacgggg
aggtggattgattttaagaatgattacaaaacgatggatttgaatttcatggagagtgtt
tggtgggtgttttctcagttatttaagaaaaaccttgtttacagagggtttaaggtcatg
ccctacagtacaggctgcaagactccattgtcaaatttcgaggctaattcaaactacaag
gaagtgcctgatcctgaaataatggtgacatttccaatcattgatgatcaagaaggtgct
gcatttgttgcatggacaaccacaccatggacactgcctagtaatcttgcactttgtgtc
aactctaatcttgtatatgtcaaggtgaagagcaaatcgaatggaaaaatctatgtagtt
gctgaatctcgattatctgagcttccagtagaaaaggcaaagaaaggaacacctaatgga
gctgtggatgacaagtccaagggaaaaactaaaagctctgtggtggcttatgaagtgttg
gataaatttccaggatcttcacttgtgggtaaaaagtatgtgccattatttgattatttc
aaagaattctcagatgtggcattcagagttgttgcggatgattatgtaacttcagatagt
ggaactggaattgttcactgtgctccagcatttggtgaagatgattatcgtgtttgtttg
gaaaatcaaatcattaataagggagaaaatctagttatggcagttgatgatgatggctgc
tttacagaaagaattactgatttcagtggtcgatatgtcaaagaagcagataaagatatc
attcaagcagtgaaggacaagggcaggttggtcaagactggaagctttacacattcatat
ccattttgttggagatctgatacccctcttatctacagagcagttcccagttggtttgta
gcagtagagaagttgaaagatcaattgctagagaacaatgagaaaacaaaatgggttcct
gcttttgtgaaggaaaaaagatttcataattggcttgaaaatgcaagagattgggccatt
agtagaagtagattttggggtactcctcttcctatttggatcagtgaagatggtgtagat
attgaagttattggttcagttgaagaacttgaaaaacgttcaggggtgaaagttactgat
ttacatcggcacaaaattgatcacatcacaattcctagcccacgtggtgaaaagtttggt
gtgcttcatcgtgtagaagatgtatttgattgttggtttgaaagtgggtcaatgccatat
gcatatatccactacccatttgaaaatgaagaattctttcaaaagaatttccctggacat
tttgttgcagagggcttagatcaaactcgtggatggttttacactttgatggtgttgtca
actgcattatttgagaaacctgcatttaggaatctcatctgcaatggccttgttttggct
gaagatggtaaaaagatgagtaaaagattgaagaactatccttctcctatggaagtcatt
gatgattatggagctgatgcactacgattatacattataaattctccagtagtgcgtgca
gagcctttacgcttcaaaaaggatggagtctatggtgttgtgaaagatgtatttttacca
tggtacaatgcgtatagattccttgtccaaaatgcaaaaagacttgaagttgaggggctt
ccaccattagttcctcatgatccagccattcttctcaactcagctaatgttcttgatcaa
tggatcaactcagccactcaaagccttgttcattttgtcagacaagaaatggatgcatat
cgactctatactgtggttccttatctgttgaagttcattgacaatttgaccaatatatat
gtaagatttaatcgtaagagacttaaaggtcgcactggagaagaagactgcagaattgca
ctttcaactctttaccatgtgcttttaacttcttgtaaagcaatggctccattcacaccc
ttcttcactgaagttctttatcgtaacttgcgaaaagtatcaaatggatcagaggaaagc
attcacttttgcagtttccctcaagtagaaggaaaggggggaagtcgtattgaacaaagt
gttaacagaatgatgacaattatcgatcttgcacgtaatattcgtgaacgccacaataaa
cctctcaagactccacttagggagatgattgttgtacacccagatgccgagtttcttaat
gacattgctgggaaactgaaagagtatgtgttagaggagctgaatgttaaatctgttgtt
ccctgcaatgatcctttgttgtatgcttctttacgcgctgaacctgatttcagtgttttg
ggaaaaagactggggaagtcaatgcgagtagttgctgaagcagtgaaagcaatgtcacaa
gaggaaattttagcttttgaaaaatcaggagaaattactattgctactcattgcttaaaa
ctctctgatatcaagattgtgcgtggctttaaacgacccgatggagtgagcgaagaccaa
atggatgcatctggtgatggtgatgtgttggtaatattggacttacgccctgatgactcc
ttgttcgaagctggttttgcacgtgaggtggttaaccgtatccaaaaattacgtaagaaa
tcagcacttgagcccaccgacattgtggaggtctacttcaagtccttggatgaagacaaa
tcagtaactgcccaaattttaaaatctcaggaagcatacatcaaagaggcgataggttct
cctttactagactctaccctcactccagaacatgctgtaatgattgctgaggagacgtat
cacaacatttcaaattgcaactttcagatcacactgtcaagaccagctttagcatttaac
aataaagcaattcttgatttatattcagggaatgccaaacatgcagaggcattgaaggta
tatttgttatccagggatcacttcaatctcaaaacagaatttctagtgggaattaaccag
attaaagtggattgcattgaaaatcagcctgatgttgatgttgtgttgggagagcacgtg
ttcttaacagttggggattattactcccaaaccaccaacaacaattcttga
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