KEGG   Lachancea thermotolerans: KLTH0F19228g
Entry
KLTH0F19228g      CDS       T01117                                 
Name
(RefSeq) SCF ubiquitin ligase complex subunit HRT1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lth  Lachancea thermotolerans
Pathway
lth03420  Nucleotide excision repair
lth04111  Cell cycle - yeast
lth04120  Ubiquitin mediated proteolysis
lth04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    KLTH0F19228g
   04120 Ubiquitin mediated proteolysis
    KLTH0F19228g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0F19228g
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    KLTH0F19228g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lth04121]
    KLTH0F19228g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0F19228g
Enzymes [BR:lth01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     KLTH0F19228g
Ubiquitin system [BR:lth04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   KLTH0F19228g
  Multi subunit type E3
   SCF complex
    Ring finger protein
     KLTH0F19228g
   Cul2 complex
     KLTH0F19228g
   Cul3 complex
     KLTH0F19228g
   Cul4 complex
     KLTH0F19228g
   Cul7 complex
     KLTH0F19228g
   Cul8 complex
     KLTH0F19228g
   Cul9 complex
     KLTH0F19228g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      KLTH0F19228g
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      KLTH0F19228g
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 PHD_NSD zf-RING_16
Other DBs
NCBI-GeneID: 8293258
NCBI-ProteinID: XP_002555022
UniProt: C5DJU6
LinkDB
Position
F:complement(1556655..1556987)
AA seq 110 aa
MSEDRMDLDEPDVVQSEPVPKKRFEVKKWTAVAFWSWDIAVENCAICRNHIMEPCIQCQP
TAMTDTDNECVAAWGACNHAFHLHCINKWLQTRNACPLDNQTWQFAKYGR
NT seq 333 nt   +upstreamnt  +downstreamnt
atgtcagaggataggatggacctggacgaaccagatgttgtgcagtcagagcctgtacca
aagaaaagatttgaagtcaagaagtggacggctgttgcgttttggtcgtgggatatcgca
gtggagaactgtgctatctgcagaaaccacattatggagccgtgcattcagtgccaaccc
accgctatgacagacactgataacgagtgtgtagcagcttggggtgcatgcaaccatgcc
ttccacctacactgcatcaataaatggcttcaaaccagaaacgcttgcccgttggataac
cagacttggcagtttgcgaaatacggcaggtga

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