Lachancea thermotolerans: KLTH0G18326g
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Entry
KLTH0G18326g CDS
T01117
Name
(RefSeq) KLTH0G18326p
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0G18326g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G18326g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLTH0G18326g
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
AAA_15
RsgA_GTPase
MMR_HSR1
ORC-CDC6-like
Dynamin_N
AAA_24
KfrB
AAA_28
Motif
Other DBs
NCBI-GeneID:
8294117
NCBI-ProteinID:
XP_002555822
UniProt:
C5DNM4
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Position
G:complement(1579374..1580183)
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AA seq
269 aa
AA seq
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MSLAAEVRDLTYKFPHSDKASLCNIEIEIPWNTRTLIIGSNGAGKSTLLKLLSGKHLCLT
GKIRVNGLDPFSPHSMHQNEADECQITTYLGTEWCHMSIIHRDIGVLELLESIGFHAHRE
RGETLIDILDVDVNWRMHRLSDGQKRRVQLTMGLLKPWRLLLLDEVTVDLDVRARSRLLS
FLEQETKARRCSIVYATHIFDGLAEWPDRVVHLRDGRIVQQLSYAEEVRFSREDSSVVEH
NDNSVTIGYAKSLHPLALTWLSQDETSKK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagctgccgaggtcagggatctgacttacaagtttccccacagcgataaagcg
tcgctctgcaacattgagatcgaaataccctggaatactcgcactctgataattgggtcc
aacggtgcagggaagtctacgctgcttaagctgctcagtggaaagcacctgtgcctcaca
ggcaagatcagggttaacggccttgacccgttcagcccacactcaatgcaccaaaacgag
gccgacgagtgccagatcacgacgtacttgggcactgagtggtgtcacatgtctatcatc
caccgcgacattggcgtcctggagctgctcgagagtatcgggttccacgcgcaccgcgag
cgtggcgaaacactcatagatatcttagacgtggacgtcaactggcgcatgcatcgcctc
agtgatgggcaaaagcgccgtgtgcaactaacgatgggccttttgaagccttggcgtctg
ctgctacttgacgaggtgactgtggatctcgacgtccgtgcccgcagccgcctgctgtca
ttcctagaacaggagacgaaagcgcgccgctgcagcatcgtatacgcgacccacattttt
gatggccttgccgagtggcccgacagagtcgtacatttgcgcgacggtcgcatcgttcag
cagctctcgtacgcagaagaagtacgcttcagccgcgaagacagctccgtcgtggagcac
aacgataactccgtcaccattggctacgccaagtcattacacccgctggcgctgacttgg
ctctctcaagatgagacatctaagaaatga
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