Limnobacter thiooxidans: RGQ30_04840
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Entry
RGQ30_04840 CDS
T09704
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
lto
Limnobacter thiooxidans
Pathway
lto00540
Lipopolysaccharide biosynthesis
lto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RGQ30_04840 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lto01005
]
RGQ30_04840 (lpxC)
Enzymes [BR:
lto01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RGQ30_04840 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
lto01005
]
Lipid A
RGQ30_04840 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BET24983
UniProt:
A0AA86IZK0
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Position
537889..538809
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AA seq
306 aa
AA seq
DB search
MKQRTLKQVLSATGIGLHSGKRVTMTLRPAPPDTGIVFRRVDLPEPVDFPVNALAIGDTR
MASTLEKDGAKVSTIEHLMSALCGLGVDNAYIDLTAVEVPIMDGSAISFVFLIQQAGLVE
QSALKKFIRVKKAIEIREGQGAGLKYASLRPYEGFRLKFEIDFGHPAIDKTGQMVEIDFS
STSFTRDIARARTFGFTQDVETLRNLGLALGGNLDNAIVMDEYRILNPDGLRYDDEFVKH
KVLDAIGDLYVIGHPIIGEYQAFRSGHGLNNQLIRALIKDPSAYEVVTFESVRETPTVFR
ADWAVA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagagaaccctaaaacaggtgttgagtgccacgggcatcggtttgcattcaggc
aaacgggtgaccatgactttgcgccccgcacctcctgacaccgggattgtattcagacgg
gttgatttgcccgagcctgtggattttcccgtcaatgcgctggccattggtgacacgcgc
atggcctcaaccctcgagaaagacggggccaaggtatccacaattgaacacttgatgtcc
gccctgtgtggcttgggtgttgataatgcttacattgacctcaccgcagtcgaagtgccg
atcatggatggcagtgcaatctcttttgtctttctgatccagcaggccggtttggtcgag
caatctgcgcttaaaaaattcattcgggtcaaaaaagcaattgaaatacgtgaagggcaa
ggggcgggactgaaatacgccagcctgaggccttatgaaggctttcggttgaagtttgaa
atcgattttggtcacccggctatcgacaaaaccgggcaaatggtcgagattgatttttca
agcacatctttcacccgcgacattgcacgcgcgcgcactttcggtttcacccaagacgtt
gaaaccctgcgcaaccttggcctggcgctaggtggcaaccttgacaatgccattgtgatg
gacgaataccgcatcctgaatccggacggattgcgttacgacgatgagtttgtcaaacac
aaagtgctggacgccatcggtgacttgtacgtgattggtcatcccattattggtgaatat
caggcattccgttcggggcatggcttgaataaccagttgattcgggctctgatcaaggat
ccgagtgcctacgaagtggttacttttgaaagtgtcagggaaacccccacagtatttcgt
gccgattgggctgtggcctga
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