Limnobacter thiooxidans: RGQ30_22810
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Entry
RGQ30_22810 CDS
T09704
Symbol
acrB
Name
(GenBank) efflux RND transporter permease AcrB
KO
K18138
multidrug efflux pump
Organism
lto
Limnobacter thiooxidans
Pathway
lto01501
beta-Lactam resistance
lto01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ30_22810 (acrB)
01503 Cationic antimicrobial peptide (CAMP) resistance
RGQ30_22810 (acrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_22810 (acrB)
01504 Antimicrobial resistance genes [BR:
lto01504
]
RGQ30_22810 (acrB)
Transporters [BR:
lto02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RGQ30_22810 (acrB)
Antimicrobial resistance genes [BR:
lto01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGQ30_22810 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BET26780
UniProt:
A0AA86J806
LinkDB
All DBs
Position
2536014..2539148
Genome browser
AA seq
1044 aa
AA seq
DB search
MSRFFIDRPIFAWVIAIVIMLAGVLAITSLPVAQYPAIAPPAVTISATYPGASAETLQDS
VTQVIEQRMTGLDGLRYMKSTSDSTGRLRLELTFEPGTNPDIAQVQVQNKLSLATALLPS
AVQRQGIQVTKSSAGYLLVIAFTAVDGAFTSTELADFITSNVQDTMSRVNGVGEVQVFGS
PYAMRIWMNPEKMSQFKITPGDIRSAVQAQNAQVSAGELGAAPAVKGQSLTATITAQSLL
ETPEDFQQIVLRTTADGASVRLKDVARIDYGSENYTTLPRWNGRNASGIGIRLASGANAL
DTAESVIKEMERITPLIPEGMEWDIAYDTTPFVKISIEGVVKTLIEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAVLSAFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMDQITGALIGIGLVLSAVFVPMAFFPGSAGVIYKQFSITIVSAMAL
SVIVALVLTPALCATMLKPIEKGHSHEKKGFFGWFNRKFDASSARYQGVVGKMLHKSGRY
LIIYGGLLAVTAFMFTRLPTSFLPDEDQGVFFTQVQLPAGATQEQTLAVLAKMEDYFLNK
EGANVKSLFTVAGFSFSGTGQNSGIGFVRLRDWGERPGKENSAAGIVQRASKEFASWPEA
QAFAFAPPPIRELGNALGFNLFIQDRTGLGRDALLQARNTMIAEAAKNPVLTGVRPNAQE
NTPQYQLDIDNAKAGALGVSVAEISDTLTSAWGGSFINDFLDRGRVKRVYMQADAPYRML
PEDLNRWYVRNGQGEMVPFGNFASAQWTMGSPRLERYNGLPAVEIQGQAAPGMSSGDAMN
AMEDIAANLPEGLGIEWTGLSYEERQSGSQAPLLYALSLLIVFLCLAALYESWSIPFAVM
LIVPLGVVGALVAASSRGLANDVYFQVALLTTVGLSAKNAILIVEFAKEEYEKGLDLLDA
TLVAVRMRLRPILMTSLAFGLGVVPLAISTGAGSGSQNAIGTGVLGGTISATVLGIFFVP
LFFVVVTQMFSKKRAEKKAATVGE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgattttttattgatcgcccgatttttgcctgggtcatcgccattgtcatcatg
ctggccggtgtgctggccattaccagcttgccggtggcacagtaccccgcgattgctcca
ccggcagtgaccatttccgccacctaccccggtgcgtctgctgaaacacttcaggactca
gttactcaggtgattgaacagcgcatgacgggcctggatggcctgcgttacatgaagtcc
accagcgactccacgggcaggcttcgccttgaactgacgtttgaacccggcaccaacccc
gacattgcacaggtgcaggttcagaacaaactgagcctggccaccgccctgttgcccagt
gccgtgcaacgccagggtattcaggtgacaaaaagttcggcgggttacctgctggtcatt
gcatttaccgcagtggatggggcctttacatccaccgaactggccgacttcattacctcc
aatgttcaagacaccatgagccgtgtcaacggtgtgggcgaggtgcaggtgttcggtagc
ccgtatgccatgcgcatctggatgaacccggagaaaatgagccagttcaagatcaccccg
ggtgatattcgcagtgcagttcaagcccagaatgcgcaggtttcagccggtgaactgggt
gcggcaccagccgtgaaagggcaatcactgacagccaccatcaccgcgcaaagtctgctg
gaaaccccggaagattttcaacaaattgtattgagaaccaccgccgatggggcaagcgtg
cgcctgaaagatgtggcccgcattgactacggcagtgaaaactacaccaccctgccccgc
tggaatggccgaaatgcctcgggtattggtatccgcctggcttccggtgccaatgcgctg
gacacggctgaatcggtgatcaaggaaatggagcgcatcacgccgctgattccggaaggc
atggaatgggacatcgcctacgacaccaccccgtttgtaaaaatttcaattgaaggcgtc
gtgaaaacgctgatcgaggccatcatcctggtgttcctggtgatgtacctgttcttgcag
aatttccgcgccacgctgatcccaacgattgcggtacccgtggtgttgctgggtaccttt
gccgtgctgtccgcattcggattttcaatcaacacattgaccatgtttgccatggtgctg
gccattggcctgctggtggacgacgccattgtggtggttgaaaacgtggaacgcgtgatg
gcagaagaaggcctctcaccactggaagccacccgcaaatccatggaccagatcaccggc
gcgttgatcggtattggattggtactttctgccgtgtttgtacccatggcatttttcccg
ggctcggctggtgtcatttacaagcagttttccatcaccattgtgtcagccatggcgctg
tcggtgattgtggctttggtgctcacgcccgccctgtgtgccaccatgttgaagcccatt
gaaaaaggccacagccacgaaaagaaaggattctttggctggttcaaccgaaagttcgat
gccagcagcgcgcgttatcaaggtgtggttggcaaaatgctgcacaagtcaggccgctac
ctgatcatctatggtggcttgctggcggtgactgccttcatgtttacacgcctgcccacg
tccttcttgcctgatgaagaccaaggcgtgtttttcacccaggttcaactgcctgctggc
gcaacccaggaacaaacgctggccgtgctcgccaagatggaagactacttcttgaacaag
gaaggtgcaaacgtgaagtccctgttcaccgtggccggtttcagcttctcgggcactggc
cagaattcaggcattggctttgttcgcttgcgcgactggggcgaacggcctggcaaggaa
aactcggccgctggtattgttcagcgtgcatcaaaagagtttgcaagctggccagaagcg
caggcctttgcctttgctccacccccaattcgggaactgggcaatgcgctgggctttaac
ctgttcattcaggaccgtaccgggctgggtcgcgacgccttgctgcaagccagaaacacc
atgattgccgaagcggcgaaaaacccggttctcactggcgttcgacccaacgcacaggaa
aacacaccgcaataccaactggacatcgacaacgccaaggccggtgcgctgggtgtttcc
gtggctgaaatcagcgacaccctgacatcagcctggggcggcagcttcatcaatgacttc
ctggacaggggccgtgtgaaacgtgtttacatgcaagccgacgcgccttaccgcatgctg
cctgaagacctgaaccgctggtatgtgcgcaatggtcagggtgaaatggtgccctttggt
aactttgcatcggcgcaatggaccatgggctcgccccgactggaacgctacaacggtctg
cctgccgtggaaattcaaggacaggccgcaccaggcatgagttcgggcgacgccatgaat
gcgatggaagacattgcagccaacttgcctgaaggcttgggcattgaatggactggcctg
tcgtatgaagaaaggcaatccggctcgcaggcccccttgctgtacgcgctgtcgctgttg
attgtgttcctgtgcctggctgccttgtatgaaagctggtccattccgtttgcggtcatg
ctgattgtgccgctgggtgtggtgggtgcactggtggcagccagcagccgcggtttggcc
aacgacgtgtacttccaggtggcactgctgaccaccgtcggtctgtctgcgaaaaacgcc
attctgattgtggaatttgccaaggaagaatacgagaaaggcctagatttgctggacgcc
acactggtggctgtgcgcatgcgtttgcgcccgatcctgatgacttcgctggcgtttggt
ttgggtgtagtgcccttggccatttcaacgggcgcaggttcaggcagccagaacgcgatt
ggtaccggcgtgttgggtggcaccatttctgccacagttctgggtattttctttgtgccc
ctgttcttcgtggtggtgacccagatgttcagcaaaaagcgggcggaaaagaaagctgcc
accgtgggggaatga
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