Limnobacter thiooxidans: RGQ30_30120
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Entry
RGQ30_30120 CDS
T09704
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lto
Limnobacter thiooxidans
Pathway
lto01501
beta-Lactam resistance
lto01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lto00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ30_30120
01503 Cationic antimicrobial peptide (CAMP) resistance
RGQ30_30120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lto03036
]
RGQ30_30120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lto02000
]
RGQ30_30120
01504 Antimicrobial resistance genes [BR:
lto01504
]
RGQ30_30120
Chromosome and associated proteins [BR:
lto03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RGQ30_30120
Transporters [BR:
lto02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RGQ30_30120
Antimicrobial resistance genes [BR:
lto01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGQ30_30120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
BET27511
UniProt:
A0AA86J4E5
LinkDB
All DBs
Position
complement(3335167..3336438)
Genome browser
AA seq
423 aa
AA seq
DB search
MYSNSLNSKQTQASPYSRSFAGVTFFPALLVTVLSTTLLLGCGSGADAQAPGGPAGGQPA
PVPVVEVKTEQLDLVYEYPAQIAGLREVEIRARVAGIIERRMFEEGGRVKKGQSLYSLDN
APYQTALTRALADENSAKVRTAQAERDYKRVMPLAESKAVSQSELDAAQSAFEVAKADQQ
VASAAVRTARLNLEYARVQSPVNGFASRSQYSEGSFVSGPSELLTTVTQVDQVYVNFGIP
EKDHEQLRKGVASGAVSLPNGDMVVEVLGADGEPMGLKAKLGFKDVRVNPATGTVDARAV
LANDKEVLSPGQFVRVRISGAVQKDAVLLPQRAVLENPAGGKVVMTVSPENTVAPRPVEV
AQWKGDQWVVTKGLANGDKVITDGFMKAPPGTPVKPVIAGDAAQAQQAPAQPAATPEATE
TKQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcaactcattgaattcaaaacaaacccaagcctccccctatagccgatcattc
gctggggtgacctttttcccggccttgttggtgactgtattgtccacgactttgctcttg
ggctgtggttcaggtgcagacgcgcaagcgcccggcggacctgctggtggtcagcccgca
cctgtgccggtggtggaggtgaaaaccgagcagttggacctggtttacgagtaccccgca
caaattgccggtcttcgcgaggttgaaatccgcgcccgtgtggccggtattatcgagcgc
cgcatgtttgaagagggagggcgcgtgaaaaaaggccagtcactgtacagccttgataat
gcaccctatcaaactgctttgacgcgcgctttggccgatgaaaattcagccaaagtacgc
acagcccaagccgagcgcgactacaaacgcgtcatgccactggctgaaagcaaggctgtt
tctcagtctgagctagacgctgcgcagtctgcctttgaagtggccaaggctgatcagcaa
gtggccagtgcggcagttcgcacagcccgcttgaacctggaatacgcgcgggttcagtca
cccgtgaatggttttgcgagccgctcacagtattccgagggcagcttcgtgtcgggtccg
tccgaattgttgaccaccgtcacccaggtggaccaggtgtatgtgaacttcggcattcct
gaaaaagaccacgagcaactgcgcaaaggcgtggccagcggggcagtcagcttgcccaat
ggcgacatggtggttgaagtgctgggagccgatggcgagcccatgggcttgaaagcgaag
ctgggcttcaaggatgtgcgggtgaaccctgccacgggcactgtggacgcaagggctgtg
ttggccaatgacaaggaagtgctgagcccgggccagtttgtgcgggtgcgcatcagtggt
gccgtgcaaaaagacgcggtgctgttaccgcagcgtgccgtgctggaaaatccggcgggt
ggcaaagtggtaatgaccgtcagcccggaaaacacagtggccccgcgcccggttgaagtg
gcccagtggaaaggcgaccagtgggttgtcacaaaaggtctggccaatggcgacaaggtg
attaccgacggcttcatgaaagcgccccccggtacaccggtaaaaccggttattgccggc
gatgcagcacaagcccagcaggcgcctgcgcaacccgcagccacacctgaagcaactgaa
accaagcagtaa
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