Leucobacter triazinivorans: EVS81_01845
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Entry
EVS81_01845 CDS
T05843
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ltr
Leucobacter triazinivorans
Pathway
ltr03030
DNA replication
ltr03410
Base excision repair
ltr03420
Nucleotide excision repair
ltr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ltr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EVS81_01845 (ligA)
03410 Base excision repair
EVS81_01845 (ligA)
03420 Nucleotide excision repair
EVS81_01845 (ligA)
03430 Mismatch repair
EVS81_01845 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ltr03032
]
EVS81_01845 (ligA)
03400 DNA repair and recombination proteins [BR:
ltr03400
]
EVS81_01845 (ligA)
Enzymes [BR:
ltr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EVS81_01845 (ligA)
DNA replication proteins [BR:
ltr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EVS81_01845 (ligA)
DNA repair and recombination proteins [BR:
ltr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EVS81_01845 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EVS81_01845 (ligA)
MMR (mismatch excision repair)
DNA ligase
EVS81_01845 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EVS81_01845 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
zf-IS66
PTCB-BRCT
Nlig-Ia
BRCT_2
DNA_meth_N
RNA_lig_T4_1
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QBE47725
UniProt:
A0A4P6KBP5
LinkDB
All DBs
Position
complement(399521..401980)
Genome browser
AA seq
819 aa
AA seq
DB search
MNPNSDIPTEFDAARAEAARLTGEIERLRTAYYSEAASLVSDAEYDEMFHRLEAIERAFP
ELAGQDSPTQEVGAAVVSAGFPEHEHAERMLSLDNVFSLEEFREWAEKTRAAAGREVRWL
TELKIDGLAISLAYRNGVLETATTRGDGRVGEDITENVDLIPVIPRRLTGTGIPEFFEAR
GEVFLTTEDFAALNARQRALQEEFAAEQLAKGVPEEKIAVRYPDFANARNTAAGSLRQRA
EKKNARELELMRDRLGRLSLYMHGIGAWQHPGFENQSDAYALLERWGLPVSPHSRVFDGV
DEVAAFIEDRGAHRHDVEHEIDGIVVKVDEFALHAELGETSRAPRWAIAYKYPPEEVHTK
LLDIRVGVGRTGRATPYAVMAPVKVAGSTVRQATLHNQQVVAAKGVRIGDTVVLRKAGDV
IPEVLGAVVEVRDGSEVEWQMPRECPECGTELRPMKEGDIDLRCPNARSCPAQLRGRVEH
IGSRGGLDIEVLGEITAAALTQPEFPAEPPLETEAGLFELSIDELVPIVVIVRDSETGEP
LLDDQTGEPRRRTPFQKLSAAMYPPGWEDATPAERRRAGITKDHRVPEPSKDVDTLLAEL
EKAKTKPLWRLLVSLNIRHVGPVAARALADWFGSLDAIRAASVAELSEVEGVGGIIAESL
AEWFEVDWHREIVERWAAAGVQWATPGHPGPGAAQADGGVLAGLTVVATGSLDGFTRDGA
KEAIIQAGGKAASSVSKKTDYVAAGPGAGSKLAKAEELGIPVLDAEQFAVLVAQGPAALG
LGGTPAEAAGDGAEVGAEVGGDVDDDADVHGAEVDGAES
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccccaactccgatatcccgaccgagttcgacgccgcgcgagccgaggccgcgcgg
ctcaccggcgagatcgagcgactgcgcaccgcgtactactccgaggccgcgagcctcgtt
tccgacgccgagtacgacgagatgttccaccgcctcgaggcgatcgagcgcgcgttcccc
gagctggccggacaggacagcccgacccaggaggtgggcgccgccgtggtgtcggccggg
ttcccggagcacgagcacgccgagcgcatgctgagcctcgacaacgtcttctccctcgag
gagttccgcgagtgggccgagaagacgcgcgcggccgccggacgcgaggtgcgctggctc
accgagctcaagatcgacgggctcgccatcagcctcgcctaccggaacggcgtgctcgag
accgcgacgacccgcggcgacggtcgggtgggcgaggacatcacggagaacgtcgacctc
atcccggtgatcccgcggcggctcaccgggacgggcatccccgagttcttcgaggctcgc
ggcgaggtcttcctcacgaccgaggacttcgcagcgctcaacgcgcgtcagcgcgcgctg
caggaggagttcgcggcggagcagctggccaagggcgtgcccgaggagaagatcgcggtg
cgctatcccgacttcgcgaacgcgcgcaacaccgccgcgggcagtctgcgccagcgtgcc
gagaagaagaacgcgcgggagctcgagctcatgcgggatcggctcggccggctctcgctc
tacatgcacgggatcggcgcgtggcagcaccccggcttcgagaaccagtcggatgcctac
gcgctgctggagcggtggggcctgccggtgtcgccccactcccgcgtgttcgacggcgtc
gacgaggtcgcggcgttcatcgaggatcgcggcgcgcaccggcacgacgtcgagcacgag
atcgacgggatcgtcgtgaaggtcgacgagttcgcgctgcacgccgagctcggcgagacg
agccgggcgccccggtgggccatcgcctacaagtacccgccggaggaggtgcacacgaag
ctgctcgacatccgggtcggtgtgggccgcaccggccgggcgacgccctacgccgtcatg
gcgccggtgaaggtggcgggatccaccgtgcggcaggccacgctgcacaatcagcaggtg
gtcgccgccaagggggtgcgcatcggcgacaccgtcgtgctgcggaaggccggagatgtc
atccccgaggtgctgggcgcggtggtcgaggtgcgcgacggcagcgaggtcgagtggcag
atgcctcgggagtgccccgagtgcggcaccgagctgcggccgatgaaggagggggatatc
gacctgcgctgcccgaacgcgcgctcctgccctgcccagctgcgcggcagggtcgagcac
atcggttcccgcggcggactcgacatcgaggtgctcggggagatcactgcggccgcgctc
acccagcccgagttccccgccgagccgccgctcgagaccgaggcgggcctcttcgaactg
agcatcgacgagctcgtgccgatcgtcgtgatcgtgcgcgacagcgagaccggagagcca
ctgctcgacgatcagacgggggagccccggcggcgcaccccgttccagaagctgagcgct
gcgatgtacccgccgggctgggaggatgcgacacccgcagaacgccgcagggcgggcatt
acgaaggatcaccgggtaccggagccgtcgaaggacgtcgatacgctgctcgcggagctc
gagaaggccaagacgaagccgctctggcgactgctggtctctctcaacatccgccacgtc
gggccggtcgcggcccgtgcgctcgccgactggttcggctcgctcgatgccatccgcgcg
gcgtccgtcgcggagctgtccgaggtcgagggcgtgggcggcatcatcgccgagtcgctc
gccgagtggttcgaagtggactggcaccgggagatcgtggagcgctgggcggctgcgggc
gtgcagtgggccacgccgggccaccccggcccgggggccgcgcaggccgacggcggcgtg
ctcgccgggctcacggtggtggcgaccggatcgctcgacgggttcacccgggacggggcg
aaggaggcgatcatccaggccgggggcaaggcggcgtccagcgtctcgaagaagaccgac
tatgtggcggcgggcccgggcgccgggtcgaagctggcgaaggctgaggagctcgggatc
ccagtgctcgacgcggagcagttcgccgtgctcgtcgcccaggggcccgccgcgctcgga
ctcgggggaactcccgcggaggccgcgggcgacggcgcggaggtcggcgcggaggtcggc
ggtgacgtcgacgacgacgcggacgtccacggtgcggaggtcgacggcgccgaatcctga
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integrated database retrieval system
