KEGG   Leuresthes tenuis (California grunion): 140277360
Entry
140277360         CDS       T11698                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
ltu  Leuresthes tenuis (California grunion)
Pathway
ltu04010  MAPK signaling pathway
ltu04137  Mitophagy - animal
ltu04141  Protein processing in endoplasmic reticulum
ltu04210  Apoptosis
ltu04217  Necroptosis
ltu04621  NOD-like receptor signaling pathway
ltu04622  RIG-I-like receptor signaling pathway
ltu04920  Adipocytokine signaling pathway
ltu05132  Salmonella infection
ltu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140277360 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    140277360 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    140277360 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    140277360 (traf2b)
   04217 Necroptosis
    140277360 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    140277360 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    140277360 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    140277360 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    140277360 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    140277360 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ltu03019]
    140277360 (traf2b)
   04121 Ubiquitin system [BR:ltu04121]
    140277360 (traf2b)
Enzymes [BR:ltu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140277360 (traf2b)
Messenger RNA biogenesis [BR:ltu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     140277360 (traf2b)
Ubiquitin system [BR:ltu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    140277360 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-RING_6 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX ATG16 zf-C3HC4_5 TRAFD1-XIAF1_ZnF
Other DBs
NCBI-GeneID: 140277360
NCBI-ProteinID: XP_072228445
LinkDB
Position
Unknown
AA seq 518 aa
MARISLDCQSSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEEIYEEPISILNSNEAFPDNAAGREIASLPARCLNQDCNWTGSIKEYEAQ
HEGRCEYERVQCEACQNFIVRRDKDRHNERECEARTLNCKYCKVTFNFKDIKAHDEICQK
FPLQCKDCGKKKIPREKFNDHIKSCAKSKSACPFSEVGCKSVIENGKLSDHEHSSTMEHL
RLLLPMVLSMSMARTRADASGPGEWQEDSGLGLYRAPDEGSGAAATTQSVDLDKKVTALE
NIVCVLNREVERSSLTLEAFAHQHRLDQEKIESLSSKIRQLERTMNMRDLQLSETEQLVR
ELQFCTYDGIFVWKITDFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGR
GTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPISEM
NIASGCPLFCPLAKLAGKSPYMRDDTIFIKAIVDLTGL
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggctcgcatctcattggactgtcaaagctctttaccagggattcccctcagtgtgctg
tcagtgcccatggagaataaatacaaatgtcagcagtgtcttcaggtcctgaggaagcct
gtccaggctcagtgtggccaccgcttctgtgtacactgcttcaagcaactcaccagctct
gggccaaagccttgtgaagcatgccgccaagaagagatatatgaagaacctatatctata
cttaatagtaatgaggcattcccagacaatgcagcaggtcgagagatagcaagtctgcct
gccaggtgtttgaaccaggactgcaactggactggatctataaaggagtatgaggctcaa
cacgaaggccgctgtgaatatgagcgggttcagtgcgaggcctgccaaaactttattgtt
cgccgggacaaggacagacataatgagagagaatgtgaggcgaggactctcaactgcaag
tactgcaaggtgacgttcaacttcaaggacatcaaggcccacgatgagatttgccagaag
tttcccttacaatgcaaagactgcggcaagaagaagatcccaagagaaaagttcaatgat
cacatcaagtcctgcgccaagtcaaagagtgcctgcccgttcagcgaagtgggctgtaaa
tctgtgatcgagaacgggaagctcagtgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgtccatgtctatggcccggacgcgggccgacgcttcc
ggacccggtgagtggcaggaagactctggtttgggtctgtacagggctcccgacgaggga
agcggcgctgctgccaccacgcagtcagtggacctggataaaaaagtgactgctctagaa
aatattgtgtgtgtcctgaaccgggaagtggagcgcagttctcttactctggaggccttt
gcccatcagcatcggttagatcaggaaaagattgaaagtctgtccagcaaaatacgacag
cttgaaagaacgatgaacatgagagacttgcagctgtctgaaaccgagcagctggtacga
gagctccagttctgcacctacgatgggatatttgtctggaaaatcacagacttctcgcgc
cgcaggcaggacgctgtggctggtcgagcacctgcaatgttctcaccagcattttactcc
agcaagtatggctacaaaatgtgtctccggctgtatttgaacggcgacggaacgggccga
ggaacgcacctttcactgttcttcgttgtcatgaggggcaagtgcgacgcgctgctcaag
tggccgttcagtcagaaggtgacgctgatgttactggatcagaacaacagggagcacatt
atcgatgctttccggccggatgtcacgtccacatctttccagcggccgatcagtgagatg
aacatcgccagtggctgcccactcttctgtccactggctaagctggccggcaagagccct
tacatgagagatgacaccattttcatcaaagccattgtcgaccttacaggcttatag

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