Leuresthes tenuis (California grunion): 140280296
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Entry
140280296 CDS
T11698
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04530
Tight junction
ltu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140280296 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140280296 (tiam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PDZ
PH_9
SOS1_NGEF_PH
PDZ_6
RNA_pol_Rpc82
PDZ_2
Motif
Other DBs
NCBI-GeneID:
140280296
NCBI-ProteinID:
XP_072231697
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MGNVESQNGDSSFYGNGTGHLSRKHTSRSLRLSNKQSVTRRPRHSSSVKQEHRNSETSTR
SSSTPSIPQSLAENGLELFSTADELGEFGLNPHWTQRVAMTMRPESYQHDDDPLATPTPE
TSEADTVAQDGGEDSMGDGEGEVTVEERYLQRMTEVPREGGNFKKKRSKSADMWREDSLE
FSLSDLSQEHLTSTEEMIDGGEEEEEEQFTCPRGSAGSAERASSLDHLCSQQSPGLRGQR
SRYVKNTRETECDGGGEGEDSLISPTEEDGGGYGAFTLPCRRSHCLSEGLSGLGMAAAPC
PAFQGRRAQTTQDISGVLGEGSEYGDSGIDGVTTEIDGELVSRRCKTMSASFSVYSATES
SVFNGSDSGSSSAGGGDGRGGRGGVYENFRKELDSQVWTNQGRDCREEAGSAVSDEQSSG
TLSSVYPSDSGTGCAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKHYWVSLKGCTLF
LYESDGRSGIDHNSVPKHALWAENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSGQTEL
ENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVNDAK
KRKTILEQIFLWEQNLERFHIDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLAMGRLG
IFSVSSFHALVSARTESSARRRNQPLSRTFSKRRSRFSSLWGLDTTSKRKTKGHPSVDQV
FVDGMEPVRKPQERMFEDSISEKSKITEDSVKSQHVDSDIWVPEYLKPSWVCLPNNQPVL
AIVQPGETALEVLSTVCKTHNIDPSGHYLRVKVWVDHQMLFYVPKFEEDISDLLYKEIEI
CPKATKVVRFDKTESCTIGYGFSVAVVDEDGEQQLHITDVKAGGLASAKGLKAGDEILFL
NGKPASALQLDDMRAAFVNHMLTLSISTLPQLDPRVLCSQPPRRSEGEQDPATDIFSQSQ
EDILDEVSGLTVESPDESLEEGPLLTLRSPGDHSDDRSFMGTGQKSTEQVTAFCRSLHDM
NPHERPMSSSSSSSSSSLSPSPVSALPPTAGSATQRQLSHADKLRKVIGELVETEKTYVK
DLNCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQVEFLSTLEDGIRLVPDLERLER
VEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPEFKAFLAERNPRQQ
HSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHINDMQKL
HEEYGAVFDQLINEQTADKKEVPDLSMGDLLLHSTVIWMNPPASLVKSKKDPELAAFVFK
TAVVFVYKDCSKHRKKIGGSHRASVSDDKDPFRFRHMIATDSLQVRTLANSESTALCEIV
HTRSESEGRPERIFQLCPSSPDGKKDFLKAVHSILREKQRRQLLKTESLPPNQQYVPFGG
KRLSALKGARPAFNRAASAPSRTLARRTLVRNRITIDTDLVFHGNNNCDDANPIQQPSYC
SSNSQHAPHQSHKPQGEDTDRWVEEQFNFGCYEDQCEAIDVRQVKETDILSDDDEYCKSV
RSASAEPDALEGEMEGLILQDKEVKLNGRVETRSECVQSVKVDQMKHGDDSPSVDSFTSC
VPLCVKLAPLKQCAVEGATNKDHDVIWVRRDDFTNRCNSDVF
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtggagagtcagaatggagacagtagtttctatggcaatgggacgggacat
ctgtctcgtaagcacacatcacgctctctccgcctctccaacaagcagtcggtcacccgc
cgtccaaggcactcctcatcagtaaaacaggaacacagaaactctgaaacctcaactcgt
tcctctagcaccccaagcatcccacaatccttagcagagaacggactggaacttttcagc
accgcagatgagttgggagagtttggcctcaatccgcactggacgcaacgtgtcgctatg
acaatgagaccagagtcctatcagcacgatgatgaccccctggccacaccgactcccgaa
acttcagaggcggatactgtcgctcaggatggaggagaggactcaatgggggatggggag
ggagaagttactgtggaggaaaggtaccttcagcgaatgactgaggttccccgagaagga
gggaattttaaaaagaagcggtcaaagtcggcagacatgtggagagaagatagcctggag
ttttctctttctgacctgagccaggagcatctgaccagcactgaggagatgatcgatgga
ggagaggaagaggaagaagaacagttcacatgccccagaggcagtgcaggttcagctgaa
agggcatcgtctctggaccatctgtgcagccagcagagtcctggcctccgggggcagagg
agtcgctatgtcaaaaacaccagagaaacagagtgcgatggaggtggagaaggggaggat
agcttgatttctccaactgaagaggacggtggtggatatggagcgttcacgctcccctgt
cgacgctctcactgcctttctgaaggcttgtcagggctggggatggcagctgcaccatgc
cctgccttccagggacgacgtgcacagactactcaggacatctctggtgtcctcggtgag
ggaagcgagtatggtgacagcggaatcgatggtgtcaccacagagattgatggagaactg
gtatcccgacggtgtaagaccatgtcagcctctttctcagtgtactcggccactgagagc
agtgtttttaatgggagcgacagtgggagcagcagcgcaggtggaggagacggaagagga
ggcaggggaggagtgtatgaaaatttccggaaggaactggacagtcaagtatggacaaat
cagggtcgggactgcagggaggaggcaggctcggctgtaagtgatgagcagagtagcggc
acactaagcagcgtgtatccatctgatagtgggactggctgcgcacaaggcacggtcagg
aaagcaggggctctggctgtgaagaactttcttgttcataagaaaaacaagaaggtggaa
cctgcgacaaggcgcaagtggaagcattactgggtgtccctaaaaggctgcacccttttc
ctgtatgaatctgatggccgctctgggattgaccataacagcgttcctaaacatgcattg
tgggcggagaacagcatcgtccaagctgttcctgaacatcccaagaaagactttgtcttc
tgcctcagcaactcagtaggagatgctttcctcttccagacatctggccaaactgaactg
gaaaactggatcactgcgatccactctgcatgtgccgctgctctcgctcgacaacaccac
agggaagacacagtgcgacttctgcgaaccgagattcgcaagttagagcaaaagattgac
atggatgagaaaatgaagaagatgggcgatatgcagctgtccactgtcaatgatgccaag
aagagaaagaccatacttgagcagatcttcttgtgggagcagaacctggagcggttccac
atagatctcttccgttgtcgctgctacctggccagtctgcagggtggtgaacctcccaat
cccaaacgcctcttgggttttgcttcacgtcccaccaaactggcgatgggtcgcctgggc
atcttctctgtttcttcttttcacgcactggtgtctgcccgtactgaaagcagcgccaga
aggcggaaccagcccctgtctcgtaccttcagtaaacgtcgtagccgtttctcctctctc
tggggtctggacaccacgtccaagaggaagaccaagggtcatccatcagtcgaccaggta
tttgttgatgggatggaacctgtaagaaagccccaggagcgcatgtttgaagactccatc
agtgaaaaatcgaaaataactgaagactctgtaaaaagtcaacacgtcgacagtgatatt
tgggttcctgagtacctaaaaccctcctgggtgtgcctgccgaacaatcagcctgtgctg
gccatcgtacagcctggtgagacagcgctggaagtcctgagcaccgtctgcaagacccat
aacatcgacccctctggacactacttgcgtgtaaaggtgtgggttgaccaccaaatgctt
ttttatgttcccaaatttgaggaggacatctctgatctgctctacaaagagattgagatt
tgccccaaagctaccaaggtggtccggtttgacaaaacagagtcctgcaccattggatat
ggtttttctgtggcagttgttgatgaggatggagagcagcagcttcatattactgatgtg
aaagcaggaggactagcttcagccaaaggtttgaaagcaggggatgagattctcttcctc
aatggtaaacctgcatctgccctccaattggatgatatgagggctgcatttgtgaaccat
atgcttacgttgagcatcagcactctgccccagttggaccctcgggtgctgtgctcccag
ccaccccggcgctctgaaggcgagcaagacccagccactgacatcttttcccagagccaa
gaggacatcctggatgaggtgtcaggtttgactgtggagagcccagatgagagcttggag
gaaggacctctactaaccctgcggagccctggagatcattctgatgacagatcctttatg
ggaactggacaaaagagtacagagcaggtcactgctttctgccgcagtctccatgacatg
aatccccatgagcgccctatgtcatcctcctcatcttcgtcttcgtcgtccctctccccg
agcccggtgtcggctttaccacccacagcaggctctgccacacagagacagctctctcat
gcagacaaactgcgcaaggtcatcggtgaactagttgagacagagaagacgtatgtcaaa
gacctgaactgcctaatagagtgctacttgacacctttacagaaagagagcttccttaca
caagatgagctggacgttttgtttggtaacctcggggagatggtggaattccaggtggag
ttcctgagcactctggaagatggaatcagattggtcccagatctggaaagactagagaga
gtcgagcagtttaagaaggtgctgttttccttgggcggttcattcctttattatgctgat
cgcttcaagatctacagtgctttctgtgctagtcacaccaaggtccccaaagtgcttgcc
aaagctaaaactgacccagaattcaaagctttcctggccgagagaaaccccagacagcaa
cattcatctactctggagtcctacctgatcaaacccatccagagagttctgaagtaccct
ctgctgctgagggagctctactctctcacagaccctgacagtgaagaacactaccacctg
gacgttgcgatgaaggccatgaacaaagtggcgagtcacatcaatgatatgcagaagctt
catgaggagtatggtgctgtttttgaccagctcatcaatgaacaaactgctgataaaaaa
gaggtgcctgacctgtcaatgggggatctcttgctacattcaactgtgatctggatgaac
cctccagcctctttggtcaagagcaaaaaggaccctgaattggcagcctttgtgttcaaa
acagcagttgtatttgtgtacaaagactgctccaagcacaggaaaaaaattggcggatct
catcgtgcatctgtaagtgatgacaaagatcctttccgtttccgtcacatgattgcaaca
gactctctgcaagtccgtactcttgcaaactctgaatccacagcattgtgtgaaatagtc
cacacaaggtctgaatcagaaggaagaccagagagaatcttccagttgtgccccagctct
ccagatggcaagaaggacttcctgaaagcagtccactccatcctcagggagaagcaacga
cggcagcttcttaagacggagtctctgccacccaaccagcagtatgtcccatttggtggc
aaacgtctaagtgccctcaaaggtgcacggcctgcctttaacagagcagcatcagctcca
tctcgaacactggctcgcagaacgctggtgaggaaccgcatcaccatcgacaccgatctg
gttttccatggcaacaataactgcgacgatgccaaccccatccaacagccatcctactgt
tcctcaaactcccaacacgctccccatcagtcccataaacctcaaggtgaggacacagat
cgctgggtggaagagcagtttaactttggctgctatgaagaccagtgcgaggctatcgat
gtgaggcaggtgaaggagacagacattttgagtgacgacgatgaatactgtaaatctgtt
cgatctgcgtcagcagaaccggacgccctggaaggggagatggaaggactgatcttgcag
gacaaagaagtcaagctgaatggacgggtggagactagaagtgagtgtgtgcagagtgtg
aaagtcgatcaaatgaagcacggggatgattcaccatctgtagactccttcacatcctgt
gtccccctctgtgtgaagcttgcccccttgaagcagtgtgctgtggagggggccacaaac
aaggatcatgatgtaatatgggtacggagggatgacttcactaacaggtgcaacagtgat
gtcttctga
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integrated database retrieval system
