Leuresthes tenuis (California grunion): 140318129
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Entry
140318129 CDS
T11698
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ltu Leuresthes tenuis (California grunion)
Pathway
ltu04010
MAPK signaling pathway
ltu04020
Calcium signaling pathway
ltu04510
Focal adhesion
ltu04518
Integrin signaling
ltu04519
Cadherin signaling
ltu04540
Gap junction
ltu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ltu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140318129 (pdgfrb)
04020 Calcium signaling pathway
140318129 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
140318129 (pdgfrb)
04519 Cadherin signaling
140318129 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140318129 (pdgfrb)
04540 Gap junction
140318129 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140318129 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ltu01001
]
140318129 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ltu04090
]
140318129 (pdgfrb)
Enzymes [BR:
ltu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
140318129 (pdgfrb)
Protein kinases [BR:
ltu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
140318129 (pdgfrb)
CD molecules [BR:
ltu04090
]
Proteins
140318129 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
VEGFR1-3_N_Ig-like
ig
Ig_VEGFR-1-like_5th
V-set
C2-set_2
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
140318129
NCBI-ProteinID:
XP_072251916
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MRRVTASVLHLAVTFTALLYLCTNVCCLEIKPDDKELVLAEGSSITLICSGSGSTTWKFK
REDVPYFQMEQIQSYQIEQRDATSSVLTLWNVSWKHTGVYQCVDALNGETKEVAVFVPDP
EVWFIESAHGMVTKTSEESTIPCVVTNPNITVTLYEKDTDMPIKGWYVPSEGYKAPLEDR
TYACRGELNGEVKHSQAFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVELVFF
SWDIPNRELVEFEPLTDVLSAMNMRSYVIFPRATVAHSGNYVCHVHEGVLDQMASASVNI
TVLEQGFVDVKPAQQQSISAKLQENVELRVEIEAYPPPQVRWTKDGATIKGDKTITIRQE
HEIRYVTILTLVRVRTEQRGFYTVLVTNGDDTKQVIFDLEVQVPSQIKDLTDHHLPQKRH
LVTCVAEGVPAPSIQWYSCDSMLKCNNQTAAWQPLIPQSEELTIQTNVSYSETRKVSQVH
SQVTFHKPQQVTVRCETTNQAGLIDRRDVKLVSSTLFSQVAVLAAVLALVVIFIMSVIIL
IAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGAFG
RVVEATAYGLTHTQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACT
KHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYVEKNQDDGCLISRGSTPLSQRKGYVSFG
SESDGGYMDMSKDEPSIYVPMQEHIDTIKYADIQPSPYESPYQQDLYQEQGGSRPDLVIS
DSPSLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLISEGKLVKICDFGLARDIMH
DSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELF
YSALKRGYRMSKPAHASDEVYEIMKKCWDEKFEKRPEFSLLVHSVGNMLTESYKKRYNQV
NDNFLKSDHPAVARTKPRLSSPFPIANPAFGSPAPITLSSSPLGPYNQNLRPGDLRQEAD
TQEVITSYNEYIIPIPDPKPEEVFTDMPSESPVSSLALEEETDSMSQDTADTLPEEDRLE
ETSERDALLGSSGTPEVEDSFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgacggcatctgtgctccacctggcagttacatttacagccttgctctat
ctctgcactaatgtgtgctgcctggagatcaaacctgatgacaaagagctcgtcctggct
gaaggctcctctatcacccttatctgctccggctccggatcgacaacgtggaagtttaaa
cgtgaagacgtgccatactttcaaatggagcaaattcaaagttaccaaattgagcaaagg
gatgccaccagcagtgttctgactctgtggaatgtgagctggaagcacactggtgtgtat
cagtgtgtggatgcactcaatggggaaaccaaggaggtggcagtatttgtcccagatcct
gaggtgtggtttatagagagcgcacatggcatggtaacaaagacgagcgaggaaagcacc
attccctgcgtggtcaccaacccaaacattactgttaccttgtatgaaaaggacactgac
atgcccatcaaagggtggtatgtccccagcgaggggtacaaggcaccgctggaggacagg
acatacgcttgccgtggagagctgaatggagaggtgaaacactctcaggcattctacgtc
ttcagcattgttgtcccagaggccatcgacgcctacatcaatgcttcaaagacggtcctg
aagcagggtgaaccgctgactgtaaactgcacggtacacggagtggagctggtgtttttt
tcttgggatattcccaacagggagcttgttgagttcgagccgttgacggatgtcctgtcc
gccatgaacatgcgctcctacgtgatcttccctcgtgccacagtggcccacagtggaaac
tacgtctgccatgttcacgaaggtgtcctagaccagatggcctctgccagcgtcaacatc
actgtgctcgagcaaggttttgtggatgtgaagcctgctcaacagcaaagcatttccgcc
aagcttcaagagaacgtggagctgagggtggagattgaggcctaccctccccctcaggtt
cgctggaccaaagatggcgccaccatcaagggagacaaaaccatcacaatcagacaagag
catgaaataaggtatgtcaccattctcaccctggtgagggtgaggacggagcagaggggc
ttctacactgtcctcgtaaccaatggagacgacacaaagcaagttatctttgacctggaa
gtccaagtaccttctcagattaaagacctgactgaccaccatctcccgcagaagagacac
ttggtgacttgtgtagccgagggggtcccagccccgagcatacagtggtacagctgtgac
agcatgctcaagtgtaacaaccagacggcggcgtggcagccattgataccacagtctgaa
gagctgaccatccagaccaatgtgagctacagtgagacacgtaaagtcagccaggtgcac
agccaagtgaccttccacaagcctcagcaggtcacggttcgctgtgagaccaccaaccaa
gcaggactcatagacagaagagacgtcaaactggtgtccagcaccctgttctcccaggtg
gcagtattggccgctgtcctggccttagtggtcatcttcatcatgtctgtcatcatcctc
attgctgtatggaggaagaaacctcgctacgagatcagatggaaggtgatagaatctgtg
agccaggatgggcacgagtacatctacgtggaccccatccacctgccctatgacctggca
tgggagatgccccgagacaacctggtgctgggtcgcactcttggatcaggagcatttggc
agggtagtcgaggcaactgcgtacggtctcacgcatacccagtccagcacaaaagtggca
gtgaaaatgctgaaatctacagccaggaggagtgagactcaggcactgatgtcagagctg
aagatcatgagtcacctgggtcctcacctcaatattgtcaacttacttggagcttgcact
aaacatggtcctctttacctggtgacagagtactgtcggtatggtgacctggtggactac
ctgcacaggaacaagcacaccttcctgcagtactacgttgagaagaaccaagatgatggc
tgcctcatttcaagaggaagcacccctctcagccagagaaaaggctatgtgtccttcgga
agtgagagtgatggaggatacatggacatgagcaaagatgagccctcgatctatgtgccc
atgcaggagcacatcgacaccatcaaatatgcagacatccagccttctccatatgagtcc
ccctaccagcaggatctctatcaggaacaaggtggcagcaggccagacctggtgatcagc
gactctcccagtctcacctatgacgatcttctgggcttcagctaccaggtggcaaagggg
atggagttcctcgcctccaagaattgcgtccatcgtgacctggctgcaaggaatgtgttg
atctctgaaggcaagctggtgaagatttgtgactttggcctggccagagatatcatgcat
gattccaactatatctcaaaaggcagcaccttcctgcccctgaagtggatggcaccagaa
agtattttccataatttgtacaccaccctgagcgatgtgtggtcatacggcattcttctc
tgggaaattttcacactgggaggaaccccctacccagatttgcccatgaatgaattattc
tacagcgctttgaagagaggctaccgaatgtccaaacctgcccacgcctctgatgaagtt
tatgagatcatgaagaaatgctgggatgaaaagtttgagaaaaggcctgagttctccctc
ctggtccacagtgtgggaaacatgctgacagagagctataagaagagatacaaccaagtg
aatgacaactttctgaagagtgaccaccctgcagtagcccgcaccaaaccccgcctgtct
tcaccctttccgatcgccaacccagcatttggctctccagctcccatcaccctatcttcc
tcccccctgggcccttataaccagaacctgaggcccggagacctcaggcaagaggcagac
acgcaagaagtcattacttcgtacaacgagtacatcattcccatcccagaccccaaaccg
gaggaggttttcactgacatgccatcagaaagtcctgtgagctctctggctctggaggaa
gagaccgactccatgtcccaggacacggctgacactcttccagaggaggaccggctggag
gagaccagcgagagagacgctctgctgggctcctcagggacgcccgaggtagaagacagc
ttcctgtag
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