KEGG   PATHWAY: lve03022
Entry
lve03022                    Pathway                                
Name
Basal transcription factors - Lipotes vexillifer (Yangtze River dolphin)
Class
Genetic Information Processing; Transcription
Pathway map
lve03022  Basal transcription factors
lve03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Lipotes vexillifer (Yangtze River dolphin) [GN:lve]
Gene
103090766  GTF2A1L; LOW QUALITY PROTEIN: general transcription factor IIA, 1-like [KO:K03122]
103074764  GTF2A1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
103091215  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
103090005  GTF2B; transcription initiation factor IIB [KO:K03124]
103083522  TBP; TATA-box-binding protein isoform X1 [KO:K03120]
103077940  TBPL2; TATA box-binding protein-like protein 2 [KO:K03120]
103073021  TBPL1; TATA box-binding protein-like protein 1 [KO:K03120]
103074901  TAF1; transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
103081395  TAF2; transcription initiation factor TFIID subunit 2 [KO:K03128]
103084951  transcription initiation factor TFIID subunit 7-like [KO:K03132]
103091616  TAF7L; transcription initiation factor TFIID subunit 7-like [KO:K03132]
103073311  TAF8; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 8 [KO:K14649]
103086961  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
103083233  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
103090783  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
103084020  TAF5; transcription initiation factor TFIID subunit 5 isoform X1 [KO:K03130]
103081593  TAF4B; transcription initiation factor TFIID subunit 4B isoform X1 [KO:K03129]
103073969  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
103082150  TAF12; transcription initiation factor TFIID subunit 12 isoform X1 [KO:K03126]
103078526  TAF6; transcription initiation factor TFIID subunit 6 [KO:K03131]
103073801  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1 [KO:K03131]
103091016  TAF9; transcription initiation factor TFIID subunit 9 isoform X1 [KO:K14535]
103070959  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K03133]
103071157  TAF11; transcription initiation factor TFIID subunit 11 isoform X1 [KO:K03135]
103084833  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
103090611  TAF15; TATA-binding protein-associated factor 2N [KO:K14651]
103071817  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
103088940  general transcription factor IIE subunit 2-like isoform X1 [KO:K03137]
103080963  GTF2F1; general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
103078318  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
103068296  GTF2H1; general transcription factor IIH subunit 1 [KO:K03141]
103088908  GTF2H2; general transcription factor IIH subunit 2 isoform X1 [KO:K03142]
103076867  GTF2H3; general transcription factor IIH subunit 3 isoform X1 [KO:K03143]
103078718  GTF2H4; general transcription factor IIH subunit 4 [KO:K03144]
103083420  ERCC3; TFIIH basal transcription factor complex helicase XPB subunit [KO:K10843] [EC:5.6.2.4]
103076192  ERCC2; TFIIH basal transcription factor complex helicase XPD subunit isoform X1 [KO:K10844] [EC:5.6.2.3]
103086615  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
103068904  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
103081126  MNAT1; CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
103069419  CCNH; cyclin-H isoform X1 [KO:K06634]
103073087  GTF2I; general transcription factor II-I isoform X1 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
lve03020  RNA polymerase
lve03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

DBGET integrated database retrieval system