Lipotes vexillifer (Yangtze River dolphin): 103078376
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Entry
103078376 CDS
T03090
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103078376 (SCN4A)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103078376 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103078376
NCBI-ProteinID:
XP_007456834
UniProt:
A0A340XCA1
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MANSSLPTVVPLGPESLRPFTRESQAAIERRVMEEEARQQRNKQMEIEEPEQKPCSDLEA
GKSLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSTL
RCCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIEDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
NGQESWASNSTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGRCPEGYECIKAGRNPNY
GYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILA
VVAMAYAEQNEATLAENQEKEEAFQQMLEKFKKQQEELGKAKAAQALEGREADEDPAHGK
DCNGSLDTSAGEKGPPRPSCSADSGISDAMEELEEAHQKCPPWWYKCSQKVLIWNCCTPW
MKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDRVLNVGNLVFTGIFTAE
MVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCNLPRWHM
HDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSS
FSADSLAASDEDGEMNNLQIAITRIKWGVGFAKAFLVGLLHGKILSPKVIMLSLGGTGEA
GEAGEAGESVSEDEKKLPPEEDENKDLKKDNHILNHMGLADDPPPSIELDHLNFINNPYL
TIHVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLDGNSSVCSTADYKPPEEDPEEQA
EESPEGEQPEECFTEACVQRFPCLYVDVSQGRGKMWWTLRRACFKIVEHNWFETFIVFMI
LLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFIVEMLLKWVAYGFKVYFTNAWCWLD
FLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFQGMRVVVNALLGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECESLMHTGQVRWL
NVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNIYMYLYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKFGGKDLFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNK
IQGMVYDLVTQQAFDITVMILICLNMVTMMVETDDQSQLKVDILYDVNMVFIIIFTGECA
LKMLALRQHYLTIGWNVFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRL
IRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFET
FGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGSSVRGDCGSPSIGICFFCSY
IIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYEAWEKFDPDATQFIDYSRLS
DFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETM
EEKFMAANPSKASYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRSVKQASYMYRHSQDSS
GDAAPEKEGLIADTLSKMYGPENGNRGLQSKGQWRGSPGDPRPATGLLSIRPADTALRPA
PPPGQTVRPGVKESLV
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcatctctgcccacggtggtgcctctgggccctgagagcctgcgccccttc
acccgggagtcccaggcagccatagaacggcgggtgatggaggaggaggcccggcagcag
cggaacaagcagatggagattgaggagcccgaacagaagccgtgcagtgacctggaggct
ggcaagagcctgccccttatctatggggaccccccgccggaggtcattggcatccccctg
gaggacctggatccctactacagtgacaagaagacattcatcgtgctcaacaagggcaag
gccatcttccgcttctctgccacacctgctctctacatgctgagcccctttagcaccctc
agatgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcgacccgccttcctggtctaagcatgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatcctggcccgaggc
ttttgcatcgaagacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagaccatcgtg
ggagccctgatccagtcggtgaaaaagctgtcagatgtgatgatactcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtatggcaatgacacctgg
aacggccaggagagctgggccagcaactccacctttgactgggatgcctacatcaatgac
gaagggaacttctatttcctggaaggctccaatgacgccctgctctgtgggaacagcagc
gatgctgggcgctgccctgagggttacgagtgcatcaaggccgggcggaaccccaactat
ggctacaccagctatgacaccttcagctgggccttcctggctctcttccgcctcatgaca
caggactattgggagaacctcttccagctgacccttcgagcagccggcaagacctacatg
atcttctttgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggcg
gtggtggccatggcatacgctgagcagaacgaggccaccttggccgagaatcaggagaaa
gaagaagcgtttcagcagatgctggagaaattcaagaagcagcaggaggagctggggaag
gccaaggccgctcaggcgctggaaggtagggaggcagacgaggacccagcccacggcaaa
gactgcaacggcagcctggacacatcggccggggagaaggggcccccaagacccagctgc
agcgcagacagcggcatctcagatgctatggaagagctggaagaggcccaccagaagtgc
ccaccatggtggtacaagtgttcccagaaagtgctcatatggaactgctgcaccccgtgg
atgaagttcaagaatattgtccacttgatcgtcatggaccccttcgtggacctgggcatc
accatctgcattgtgctcaacaccctcttcatggccatggagcattaccccatgacggag
caatttgacagagtgctcaacgtgggcaacctggtcttcacaggcatcttcacagcagag
atggtgctgaagctcatcgccatggacccctatgagtacttccagcagggctggaacatc
ttcgacagtatcattgtcaccctcagcctggtggaactgggcctggccaacgtgcagggg
ctgtcggtgctccgctccttccgtctgctgcgggtcttcaagctggccaagtcgtggcca
acgttgaacatgctcatcaagatcatcggcaactcggtgggggcgctgggcaacctgacg
ctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgcgtgtgcaagatcgccgcggactgcaacctgccccgctggcacatg
cacgatttcttccactccttcctcatcgtcttccgcatcctgtgcggggagtggatcgag
accatgtgggactgcatggaggtggccggccaggccatgtgcctcaccgtcttcctcatg
gtcatggtcatcggcaacctggtggtcctgaacctcttcttggccctgctgctcagctcc
ttcagcgccgacagcctggcggcctcggacgaggatggcgagatgaacaacctgcagatc
gccatcacgcgcatcaagtggggtgtcggcttcgccaaagccttcctcgtggggctgctg
catggcaagatcctgagccccaaggttatcatgctcagcctcggggggactggggaggct
ggcgaggccggcgaggctggggaaagtgtctcagaagacgagaagaagctaccgcccgag
gaggatgaaaacaaggacctcaagaaggacaaccatatcctgaaccacatgggcctggct
gacgaccctccccccagcattgagctggaccacctcaacttcatcaacaacccctacctg
accatccacgtgcccatcgcctccgaggagtctgacctggagatgcccacagaggaggaa
acggacaccttctcggagcctgaggatggcaagaagccgctgcagcccctcgacgggaac
tcctccgtctgcagcactgccgactacaagccccccgaggaggaccccgaggaacaggcc
gaggagagccctgagggggagcagcctgaggagtgcttcaccgaggcctgtgtgcagcgc
tttccctgcctctatgtggacgtctcccagggccgagggaagatgtggtggaccctgcgc
agggcctgcttcaagatcgttgagcacaactggtttgagaccttcattgtcttcatgatc
ctactcagcagcggagccttggccttcgaggacatctacatcgagcagcggcgagtcatc
cggaccatcctggaatacgccgacaaggtcttcacctacgtcttcatcgtagagatgctg
ctcaagtgggtggcctatggcttcaaggtgtactttaccaacgcctggtgctggctcgac
ttcctcatcgtggatgtctccatcatcagcctggtggccaactggctgggctactcggag
ctgggacccatcaaatccctgcggacactcagggctctgcgtcccctgagggcactgtct
agattccagggcatgagggtggtggtgaatgccctcctgggagccatcccctccatcatg
aatgtgctgctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctg
tttgccggcaagttctactactgcatgaacaccaccacctccgagaggttcgacatctcc
gaggtcaacaacaagtccgagtgcgagagcctgatgcacacgggccaggtccgctggctc
aacgtcaaggtcaactacgacaacgtgggtctgggttacctctccctcctgcaggtggcc
accttcaagggctggatggacatcatgtatgcagccgtggactcccgggagaaggaagaa
cagccccagtacgaggtgaacatctacatgtatctctacttcgtcatcttcatcatcttc
ggatctttcttcaccctcaacctcttcattggcgtcatcatcgacaacttcaaccagcag
aagaagaagtttggagggaaagacctcttcatgacggaggaacagaagaaatactataat
gccatgaagaagcttggctccaagaagcctcagaagccaattccccggcccaagaacaag
atccagggcatggtgtacgatctggtgacgcagcaggcgttcgacatcacggttatgatc
ctcatctgcctcaacatggtcaccatgatggtggagacggatgaccagagccagctcaaa
gtggacatcctctatgacgtcaacatggtcttcatcatcatcttcacgggcgagtgcgcg
ctcaagatgctggccctgcgccagcactacttaaccatcggctggaacgtcttcgacttc
gtggtcgtcatcctgtccatcgtgggcctcgcactctcagacctgatccagaaatacttc
gtgtcacccacgctgttccgtgtcatccgcctggcgcggatcgggcgcgtcctacggctg
atccgaggggccaagggcatcaggacgctgctctttgctctcatgatgtcactgcccgcc
ctcttcaacatcggcctcctcctcttcctggtcatgttcatttactccatcttcggcatg
tccaacttcgcttacgtcaagaaggagtcaggcatcgacgacatgtttaactttgagacc
ttcggcaacagcatcatctgcctctttgagatcaccacgtcagccggctgggatgggctt
ctcaaccccatcctcaacagtgggccccccgactgtgaccccacgctggagaacccgggc
agcagcgtcaggggcgactgcggcagcccctccatcggcatctgcttcttctgtagctac
atcatcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttc
aacgtggccacagaggagagcagcgagcccctcggggaggatgacttcgagatgttctac
gaggcgtgggagaagtttgaccccgacgccacgcagttcatcgactacagccgcctctcc
gacttcgtggacaccctgcaggagccgctgaggatcgccaagcccaacaagatcaagctc
atcacactggacctgcccatggtgccaggggacaagatccactgcctggacatcctcttt
gccctgaccaaagaggtcctgggagactctggggagatggatgccctcaaggagaccatg
gaggagaagttcatggctgccaacccatccaaggcctcctacgagcccatcacaaccacc
ctcaagaggaagcacgaggaagtgtgcgccatcaagatccagagggcctaccgccggcac
ctgctgcagcgctccgtgaagcaggcttcctacatgtaccgccacagtcaggacagcagc
ggggacgcagcacccgagaaggaggggctgattgctgacaccctgagcaagatgtatggc
cctgagaatgggaacagaggtttgcagagcaaggggcagtggaggggctcgccaggggac
cccagacctgccacggggctcctgtccatcagacccgcagacacagccctccgtcccgcc
ccacccccggggcagacggtgcgcccaggggtcaaagagtctcttgtctag
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integrated database retrieval system
