Lipotes vexillifer (Yangtze River dolphin): 103081678
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Entry
103081678 CDS
T03090
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103081678 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lve03400
]
103081678 (TDG)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
103081678 (TDG)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103081678 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
CDC27
Motif
Other DBs
NCBI-GeneID:
103081678
NCBI-ProteinID:
XP_007454338
UniProt:
A0A340WYB2
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MEAENAGSCSLQQAQAFYTFPFQQMMAEVPMAVMNEQEMPEVPAPAPAQEPTQETPKGRK
RKPRTKEPKTPVEPGKPAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLP
GKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEV
FGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
ERNTDIQEVQYTFDLRLAQEDAKKMAVKEEKYDPGYEAAYGGAYSEKPCSSEPCSFSSDG
LTADSGGSTFSDIPNGQWMTQSFTDQIPSFNNHCGMQEQEEGNHA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcaggcagctgttcccttcagcaagcgcaagctttttatacattt
ccattccaacaaatgatggctgaagttcctatggcagttatgaatgaacaagaaatgcca
gaagttccagccccagctcctgctcaggaacccacacaagagactccaaaaggaaggaaa
agaaaacccagaacaaaggaaccaaaaaccccggtggaacccggaaaacccgctgaagcc
aaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagacacattt
aaagtgaaaagaaaagtagaccgcttcaatggtgtttcagaagctgaacttttgaccaag
actctaccggacattttgaccttcaatctggacattgtgattattggcataaacccagga
ctaatggctgcttacaaagggcatcattaccctggacctggaaaccatttttggaagtgt
ctgtttatgtcagggctgagtgaggtccaactgaatcacatggatgatcacactttacca
ggaaaatatggtattggatttaccaatatggtggaaaggacaacaccaggcagcaaggat
ctttccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacagaaatat
cagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaggaagtt
tttggagtaaaagttaagaacttagaatttggacttcaaccgcataagataccagacaca
gaaactctctgctatgttatgccatcatccagtgcaagatgtgctcagtttcctcgagcc
caggacaaagttcattactacattaagctgaaagacttaagagatcagttgaaaggcatt
gagcgaaacacagacatccaagaggtgcaatatacatttgacctgcggctagcccaagag
gatgcaaagaagatggctgtgaaggaagaaaagtatgatccgggttatgaagcagcatac
ggtggtgcttatagtgaaaagccgtgcagtagtgaaccttgcagcttctcttcagatggg
ctgacagctgacagcggaggatcaactttcagtgacattccaaatgggcagtggatgacc
cagtcatttacagaccagattccttcctttaataatcactgtgggatgcaagaacaggaa
gaaggaaaccatgcttaa
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