Lipotes vexillifer (Yangtze River dolphin): 103086070
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Entry
103086070 CDS
T03090
Symbol
APOBEC3B
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03250
Viral life cycle - HIV-1
lve05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103086070 (APOBEC3B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
103086070 (APOBEC3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103086070 (APOBEC3B)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103086070 (APOBEC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APOBEC2
NAD2
NAD1
APOBEC_N
APOBEC3
SNAD4
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
103086070
NCBI-ProteinID:
XP_007454069
UniProt:
A0A340X469
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MEPQHPRQRAGMGLASKGGCSQRPRIRNPVEWLDHQTFSFHFRNLRFASGRNCTYLCYQV
ERLKHFSPDSSDWGVFQNRVYPETPCHAELCFLSWFRTKKLSPYEQYRITWFLSWSPCLP
CAEQVAAFLKENRNVRLSIFAARLYYFWKPDCQQGLRALHQQRAWVRIMSFRDFKYCWKN
FVYNQGMPFKPWKKLRKNYQFLVAKLHEILGNTMNLLKKHIFRQQFGNQHRVPQPYYRRK
TYLCYQLKQLDGFTLDKGCFQNKKQRHAEIRFIDKITSLNLDPNQSYKIICYVTWSPCPT
CAKELVDFINGQDHLSLQIFASRLYFHWVKVFQRGLQQLQAAQVSVAVMTRSEFEDCWEE
FVDNQGMPFESWDKLEQYSESISRRLQKILSPSNWNNLEDSFRDLRLGSPSPSSLRSDSR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagccccagcacccgagacaaagggcagggatgggactagccagcaaaggaggctgc
agccagaggccccggatcagaaacccagtggagtggttagatcaccaaaccttctccttc
cactttcgcaacctgagatttgccagtgggcggaactgcacctacctctgctaccaggtg
gaaagactgaagcacttctcacctgactcctccgactggggcgtctttcaaaaccgggtc
tatcccgagactccctgccacgcggaactctgcttcctctcttggtttcgcactaagaag
ctgtccccttacgagcagtaccgcatcacctggttcttgtcctggagcccctgtttgcca
tgtgcagagcaggtggctgcgttcctgaaggagaacaggaacgtgaggctgagcatcttc
gccgcccgtctctactacttttggaaaccagattgccagcaggggctgcgcgcgctgcac
cagcagagggcctgggtgcgcatcatgtccttccgagactttaaatactgttggaaaaac
tttgtgtacaatcagggaatgcccttcaagccttggaagaaactgcgtaaaaattatcag
ttcctggtggcaaagcttcatgaaattctcggaaacacaatgaatctgctaaaaaaacat
atattcagacaacagtttggcaaccagcaccgggtcccacagccctactaccggaggaag
acctatctgtgctaccagctgaagcaacttgatggcttcacgcttgacaaaggctgcttc
caaaacaagaaacagcgacatgcagaaattcgctttattgacaagatcacctcgctgaat
ctggacccaaaccagagctacaaaatcatctgctatgtcacgtggagcccttgccctacc
tgtgccaaggaactcgttgatttcatcaacggtcaggaccacctgagcctgcaaatcttt
gcctcccgcctgtacttccattgggtcaaggtgtttcagagggggctgcagcagctacag
gcagcccaggtctcagtggctgtcatgacccgctcagagtttgaagactgctgggaagaa
tttgtggataaccaggggatgcccttcgagtcctgggataagctggagcaatacagtgaa
agcataagccgtcggctccagaagatcctgtcgccctcgaattggaataatttagaggat
tccttcagagacttgagacttggatccccatccccttcgtctttaagaagtgactcaaga
tga
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