Lipotes vexillifer (Yangtze River dolphin): 103088353
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Entry
103088353 CDS
T03090
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103088353 (OTOF)
Membrane trafficking [BR:
lve04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103088353 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
dsrm_Ferlin
FerB
FerI
Motif
Other DBs
NCBI-GeneID:
103088353
NCBI-ProteinID:
XP_007470865
UniProt:
A0A340YHG3
LinkDB
All DBs
Position
Unknown
AA seq
1990 aa
AA seq
DB search
MALLVHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFSETFRWQVASSIDSNE
MLEIQIFNYSKVFSNKLIGTFRMVLQKVVEEKHVEVTDMLIDDNNAIIQTSLCVEVRYQA
TDGTVGSWDDEDFLGDEPLHEEEKDSQETDGLLPGSRPSSRPPGEKSFRRAGRSVFSAMK
LGKNRPHKDERQRQDEPAVLEMEDLDRLAIRLGDGLDPDSVSLASVTALTTNVSNKRSKP
DIKMEPGAGRPMDYQVSITVIEARQLVGLNVDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVPPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDISAGLKGYVKCDVAVVGKGDNIKMPHKANETEEDDIEGNLLLPEGVPSERQWARFY
VKVYRAEGLPRMNTSLMANMKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDMAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEPATPVS
ESCVGKMEEFFLFGALLEASMIDRKNGDKPITFEVTIGNYGNEVDGLSRPQRPRPRPQKE
PGDEEEVDLIQKSSDDETDDGGDLASVSSSPPMRPQITDRNYFHLPYLERKPCIYIRSWW
PDQRRRLYNANIIDRIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCYRFLSLA
DKDQGHWSCTRLDRERLKSCMRELESMGQQAETLRAQVKRHTVRDKLRLCQNFLHKLRFL
ADEPQHSIPDVFVWMMSNNKRIAYARVPSKDLLFSIVEDELGKDCAKLPGKRGFGSAGWT
VQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKATQGSGLHAFPPISLVYTKKQAFQLRAH
MYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHEL
RDDPPIIVIEIYDQDSMGKTDFMGRTFAKPLVKMADEAYCPPRFPPQLEYFQIYRGNVTA
GDLLAAFELLQIGPAGKADLPPINGPVDMDRGPIMPVPMGIRPVLSKYRIEVLFWGLRDL
KRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFSTLVKCFEVDLPENELLHPPLNIR
VVDCRAFGRYTLVGSHTVSLRRFIYRPPAHSAPSWSTSGGLLQGRRVLYSGGPSSHPTGE
VVVNMEPEVPVKKLETVVKLDAASDAVIKVDVAEEEKERTTKKKGGSEDPEEEEPDESML
DWWSKYFASIDTMKEQLRQQEASGIDLEEKEEMDSTEGLKGLMKGKEKARAAKEKRRRTR
SPGPGQGSEAPEKKKSKIDELKVYPKELESEFDSFEDWLHTFNLLRGKTGDNEDGATEEE
RIVGRFKGSICVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPIKVLVRVYVVRATDLHPA
DINGKADPYIAIRLGKTDIRDKENYISKQLNPIFGKSFDIEASFPMESLLTVAIYDWDLV
GTDDLIGETKIDLENRFYSKHRATCGIAQTYSTHGYNIWRDPMKPSQILTRLCKEGKVDG
PHFGPPGRVKVSNRVFTGPSEIEDENGQRKPTEEHVALLALRYWEDIPHVGCRLVPEHVE
TRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWNTDEVVLE
DDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIV
ISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSME
MATGEVDVPLASIFKQKRIKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLA
RNEPEPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLGLLMLALFFYSLP
GYMVKKLLGA
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctcgtccacctcaagacggtctccgagctgcggggcaggggcgaccggatc
gccaaagtgactttccgagggcaatccttctactcgcgggtcctggagaactgtgaggat
gtggctgacttctcagagaccttccggtggcaggtggccagcagcatcgacagcaatgag
atgctcgagattcagatcttcaactacagcaaagtcttcagcaacaagctgatcgggacc
ttccgcatggtgctgcagaaggtggtggaggagaaacacgtggaggtgaccgacatgctg
attgacgacaacaatgcgatcatccagaccagcctgtgcgtggaggtccggtatcaggcc
acagatggcacggtgggctcctgggatgatgaggacttcctgggggatgagccccttcac
gaggaagagaaggacagccaggagacagatgggctgctccctggctcccgccccagttct
cggccgccgggcgagaagagcttccggagagccgggaggagcgtgttttccgccatgaag
ctcggcaagaaccggcctcacaaagacgaacgccaaagacaagatgaaccggcagtactg
gagatggaggaccttgaccgcctggccattcggctgggggatgggctggatcctgactcc
gtgtcactagcttccgtcacagctctcaccaccaacgtctccaacaagcgatccaagcca
gacattaagatggagccaggtgccgggcggcccatggattaccaggtcagcatcacggtg
atcgaggctcggcagctggtgggcttgaacgtggaccccgtggtgtgcgtggaggtgggc
gacgacaagaagtacacatccatgaaggagtccactaactgcccctactacaacgagtac
tttgtcttcgacttccatgtgcctcctgacgtcatgttcgacaagatcatcaagatctcg
gtgattcactccaagaacctgctgcgcagtggcaccctggtgggctccttcaaaatggac
gtggggaccgtgtactcccagccggagcaccagttccaccacaagtgggccatcctgtca
gaccccgacgacatctccgcggggctgaagggctacgtgaagtgtgacgtcgccgtggtg
ggcaagggggacaacatcaagatgccccacaaggccaacgagacggaagaggatgacatt
gaggggaacttgctgctccccgagggggtgccctccgaacgccagtgggcccggttctac
gtgaaggtttaccgagcagaggggctgccccgcatgaacacaagccttatggccaacatg
aagaaagctttcattggtgagaacaaggacctggtcgacccctacgtgcaagtcttcttt
gccggccagaagggcaagacttcagtgcagaaaagcagctatgagccactgtggaatgag
caggtggtctttacagacctgttccccccgctctgcaagcgcatgaaggtacagatccgg
gactcagacaaggtcaacgacatggccatcggcacccacttcattgacctgcgcaagatt
tccaacgacggagacaaaggcttcctgcccacgctgggccccgcctgggtgaacatgtat
ggctccacacgcaactacacgctgctggacgagcaccaggacctgaatgagggcctgggg
gagggcgtgtctttccgcgcccgcctcatgctgggcctggcggtggagatcctggacact
tccaaccctgagctcaccagctccacggaggtgcaggtggaaccggccacacccgtctcc
gagagctgcgtggggaaaatggaagaattctttctatttggagccctcctggaggcctca
atgatcgaccggaaaaatggagacaagcccatcacctttgaggtcactataggcaactat
gggaacgaagtcgatggcctgtctcggccccagcggcctcggcctcggcctcagaaggag
cctggggacgaggaggaggtggatctgatccagaagtcgagtgacgacgagactgacgac
ggtggggacctggcctcagtctcctccagcccgcccatgcggccccagatcaccgacagg
aactactttcacctgccctacttggagcgcaagccctgcatctacatcaggagctggtgg
ccagaccagcgccgccgcctctacaacgccaacatcatagaccgcatcgcagacaagctg
gaagaaggcctgaatgatgtgcaggagatgatcaaaacggaaaagtcctaccctgagcgt
cgactacggggcgtcctggaggagctcagctgtggctgctaccgtttcctctccctcgcg
gacaaggaccagggccactggtcctgcaccaggctggaccgggaacgcctcaaatcctgc
atgcgggagctggagagcatggggcagcaggccgagaccctgcgggcacaggtgaagcgg
cacacggtgcgggacaagctgaggctgtgccagaacttcctgcacaagctgcgcttcctg
gcagacgagcctcagcacagcatccccgacgtcttcgtctggatgatgagcaacaacaag
cgcatcgcctacgcccgggtgccctccaaggacctgctcttctccatcgtggaggacgag
ctgggcaaggactgcgccaagctgccagggaagcggggcttcggctcggccggctggacg
gtgcaggccaagctggagctctacctgtggctggggctcagcaagcagcgcaaggacttt
ctgtgcggcctgccctgcggcttcgaggaggtcaaggcgacccagggctcgggcctgcac
gccttcccacccatcagcctggtctacaccaagaagcaggccttccagctccgcgcccac
atgtaccaggcgcgcagcctctttgccgccgacagcagcggtctctcggaccccttcgcc
cgtgtcttcttcatcaaccagagtcagtgcacagaggtgctgaatgagaccctgtgcccc
acctgggaccagatgctggtgttcgacaacctggagctctatggcgaagctcatgagttg
cgggacgacccccccatcattgtcatcgaaatctacgaccaggacagcatgggcaaaacc
gacttcatgggccggacctttgccaagcccctggtgaagatggccgacgaggcgtactgc
ccgccccgcttcccaccccagctcgagtacttccagatctaccgcggcaacgtcacggcc
ggggacctgctggccgccttcgagctgctgcagattggaccagcagggaaggccgacctg
ccgcccatcaatggcccagtggacatggaccgaggtcccatcatgcctgtgcctatgggc
atccggcccgtgctcagcaagtaccggatagaggtgctgttctggggtctgcgggacctg
aagcgggtgaacctggcccaggtggaccggccgcgggtagacatcgagtgcgcggggaag
ggcgtgcagtcgtccctgatccacaattacaagaagaaccccaacttcagcaccctcgtc
aagtgctttgaagtggacctcccggagaacgagctcctgcacccgcccttgaacatccgc
gtggtggactgccgggccttcggccgctacaccctggtcggctcccacaccgtcagcctg
cggcgcttcatctatcggcccccggcccactcagcccccagctggagcacctcgggcggg
ctcctccagggccgccgtgtgctgtacagtgggggcccctcttctcaccccacaggggag
gtcgtggtgaacatggagccggaggtgcctgtcaagaagctggagaccgtggtgaagctg
gatgcggcttctgatgccgtcatcaaggtggatgtggctgaggaggagaaagagaggacg
acgaagaagaagggcggctcagaagacccggaggaggaggagccagacgagagcatgctg
gactggtggtccaagtactttgcctccatcgacaccatgaaagagcaacttcgacagcaa
gaggcctcaggaattgatttggaggagaaggaagagatggacagcactgagggcctgaag
gggctgatgaagggcaaggagaaggcaagggctgcaaaggagaagaggaggaggacccgg
agcccaggcccgggccaagggtctgaggcccctgagaagaagaaatccaagattgatgaa
ctcaaggtgtaccccaaggagctggagtcagagttcgacagcttcgaggactggctgcac
acgttcaacctgcttcggggcaagacgggggacaacgaggatggcgcaactgaggaggag
cgcatcgtgggccgcttcaagggctccatctgcgtgtacaaagtgccactcccagaggac
gtgtcccgggaagccggctatgaccccacatatggcatgttccagggcatccccagcaat
gaccccatcaaagtgctggtccgggtctacgtggtccgggccacggacctgcaccccgca
gacatcaatggcaaagccgacccctacatcgccatccggctcggcaagactgacatccgt
gacaaggagaactatatctccaagcagctcaaccccatctttgggaagtcctttgacatt
gaggcctccttccccatggaatccttgctgacggtagccatatacgactgggacctggta
ggcaccgatgacctcattggggaaaccaagatcgacctggagaaccgcttctacagcaag
caccgcgccacctgtggcatcgcccagacctactccacacatggctacaatatctggcgg
gaccccatgaagcccagccagatcctgacccgcctctgcaaggagggcaaagtggacggc
ccccacttcgggccccctgggagagtgaaggtgtccaaccgcgtcttcacagggccctcc
gagatcgaggacgagaacgggcagaggaagcccacggaagagcacgtggcactgttggcc
ctgaggtactgggaggatatcccccacgtgggctgccgcctggtgccggaacatgtggag
acgcggccactgctcaaccctgacaagccgggcatcgagcagggccgcctggagctgtgg
gtggacatgtttcccatggacatgccggcccccggaacacctctggacatctccccccgg
aagcccaaaaagtacgagctgcgggtcatcgtgtggaacacagatgaggtggtcctggag
gatgatgactttttcaccggggagaagtccagtgacattttcgtgcgggggtggctgaag
ggccagcaggaggacaagcaggacacggacgtccactaccactccctcacgggcgagggg
aactttaactggcgctacctgttccccttcgactacctggctgccgaggaaaagattgtc
atctccaagaaggagtccatgttctcctgggacgagactgagtacaaaatccccgcgcgg
ctcaccctgcagatctgggacgccgaccacttctccgccgacgacttcctgggggccatc
gagctggacctgaaccggttcccgcggggcgcgaagacggccaagcagtgcagcatggag
atggccacgggggaggtggacgtgcccctggcttccatcttcaagcagaaacgcatcaaa
ggctggtggcccctcctggcccgcaatgagaatgatgagttcgagctcacgggcaaggtg
gaggcagagttgcatctactcactgccgaggaggcggagaagaatccagtgggcctggcc
cgcaacgaacctgaacccctggagaaacccaaccggcccgacacggcctttgtctggttc
ctcaaccccctcaagtccatcaagtacctcatctgcacgcggtacaagtggctcatcatc
aagatcgtgctggcactgctggggctgctcatgctggccctcttcttctatagcctaccc
ggctacatggtcaagaagctcctaggggcatga
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