KEGG   Lipotes vexillifer (Yangtze River dolphin): 103088795
Entry
103088795         CDS       T03090                                 
Name
(RefSeq) TNF receptor-associated factor 6-like
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04010  MAPK signaling pathway
lve04064  NF-kappa B signaling pathway
lve04120  Ubiquitin mediated proteolysis
lve04140  Autophagy - animal
lve04144  Endocytosis
lve04380  Osteoclast differentiation
lve04620  Toll-like receptor signaling pathway
lve04621  NOD-like receptor signaling pathway
lve04622  RIG-I-like receptor signaling pathway
lve04657  IL-17 signaling pathway
lve04722  Neurotrophin signaling pathway
lve04936  Alcoholic liver disease
lve05132  Salmonella infection
lve05133  Pertussis
lve05135  Yersinia infection
lve05140  Leishmaniasis
lve05142  Chagas disease
lve05145  Toxoplasmosis
lve05152  Tuberculosis
lve05160  Hepatitis C
lve05161  Hepatitis B
lve05162  Measles
lve05168  Herpes simplex virus 1 infection
lve05169  Epstein-Barr virus infection
lve05170  Human immunodeficiency virus 1 infection
lve05171  Coronavirus disease - COVID-19
lve05200  Pathways in cancer
lve05222  Small cell lung cancer
lve05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
lve05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103088795
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103088795
   04064 NF-kappa B signaling pathway
    103088795
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103088795
   04140 Autophagy - animal
    103088795
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    103088795
   04621 NOD-like receptor signaling pathway
    103088795
   04622 RIG-I-like receptor signaling pathway
    103088795
   04657 IL-17 signaling pathway
    103088795
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    103088795
  09158 Development and regeneration
   04380 Osteoclast differentiation
    103088795
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103088795
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    103088795
  09162 Cancer: specific types
   05222 Small cell lung cancer
    103088795
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    103088795
   05161 Hepatitis B
    103088795
   05160 Hepatitis C
    103088795
   05171 Coronavirus disease - COVID-19
    103088795
   05162 Measles
    103088795
   05168 Herpes simplex virus 1 infection
    103088795
   05169 Epstein-Barr virus infection
    103088795
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103088795
   05135 Yersinia infection
    103088795
   05133 Pertussis
    103088795
   05152 Tuberculosis
    103088795
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    103088795
   05140 Leishmaniasis
    103088795
   05142 Chagas disease
    103088795
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    103088795
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    103088795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lve04131]
    103088795
   04121 Ubiquitin system [BR:lve04121]
    103088795
Enzymes [BR:lve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103088795
Membrane trafficking [BR:lve04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    103088795
Ubiquitin system [BR:lve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    103088795
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-TRAF_2 SlyX Spc29 DUF4455 PspA_IM30 DUF3450 Myosin_tail_1 DUF16 ATG16 Laminin_II Med21 CENP-F_leu_zip AAA_13 DUF7310 DUF6271 EzrA TMF_DNA_bd Rhabdo_ncap_2 DUF1664 HMMR_N GCP_N_terminal Hydro_N_hd Csm1_N Sina_ZnF DivIC STX6_10_61_N DUF948
Other DBs
NCBI-GeneID: 103088795
NCBI-ProteinID: XP_007450689
UniProt: A0A340WUE8
LinkDB
Position
Unknown
AA seq 315 aa
LPNHYDLDCPTAPVPCTFSTFGCHEKMQRNHLARHLQEDTQSHMRMMAQAVQTLSLAIAP
APQRGMLPCDSASLPRVSSGCHSEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQSTYV
SDLKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGY
KLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHE
EIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGS
LRREGFQPRSTDLGI
NT seq 948 nt   +upstreamnt  +downstreamnt
ttgcctaatcattatgatctagactgtcctacagccccagttccatgcacattcagtact
tttggttgccatgaaaagatgcagaggaatcacttggcacgccacctgcaagaggatacc
cagtcgcacatgagaatgatggcccaggctgttcagaccttaagccttgcgatagctcct
gcacctcagcgtggcatgctgccatgtgattctgcctctctgccccgggtttcctctggg
tgtcactcagaggtccagaatttccaagaaaccattcaacagttagagggtcgccttgta
agacaagaccatcaaatccgggagctgactgcaaaaatggaaactcagagcacgtatgta
agtgacctcaaacgaactattcgaacccttgaggacaaagttgctgaaatagaagcacag
cagtgcaatggaatttacatctggaagattggcaattttgggatgcacttgaaatctcaa
gaagaagagaaacctgttgtcattcacagccccggattctacacaggcaaacccggctac
aaactatgcatgcgcctgcacctgcagctaccaactgcacagcgctgtgccaactacata
tcgctctttgtccacacgatgcaaggagagtatgacagccacctcccttggcccttccag
ggtacgatacgccttaccatccttgatcagtctgaagcacctgtaaggcaaaaccatgaa
gagataatggatgccaaaccagagctgcttgccttccagagacccacaatcccacggaac
cccaaagggtttggctatgtgacctttatgcatctggaagccctaagacaaagaaccttc
atcaaggacgacacgttattagtacgctgtgaggtctccacccgctttgacatgggcagt
cttcggagggagggttttcaaccacgaagtactgacttggggatatag

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