Lytechinus variegatus (green sea urchin): 121406154
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Entry
121406154 CDS
T11173
Name
(RefSeq) centrosomal protein of 290 kDa-like
KO
K16533
centrosomal protein CEP290
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121406154
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121406154
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121406154
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121406154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
ACBP4_C
GAS
Rootletin
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
121406154
NCBI-ProteinID:
XP_041453104
LinkDB
All DBs
Position
19:12826603..12905461
Genome browser
AA seq
2495 aa
AA seq
DB search
MAPIDWDKIMDVESTEMSDELADELFEELADVDKADAKDNDQWQQLFDVTRAIMMMKAAQ
ANVALEELEQLATQQGKEGVINEQGLIDQIRELEEENKRLQRMGGSGGSRDTRQLQNEVH
ELSRQVDLIQRELKEKERDLYKEKTESERLHTRAEDAEKDVRDIKRENDALRQDLRDYQR
QMESQRESLRMRRGDDVEYQDKIRQKNREINQQLEEIKNLTDNNELLNENMKDMEKKLKD
AAEEMDAIAEDYVKIKKLSGQSDSKATRLKHENDVLKEQIKELSEKLQNQIQGDDEVMTE
LNSKVEVWKSALEVKDREIDRLNLIIQQQKDQLTASEIDTDKTSVVALSKALQEKEAQLT
ILRQQLEESAREMDERAEELEMLKNDAASGAAPTVRLQNMVTKLRETLKEQEKEMKAAEE
RVLQAETDARKKDKELNEAINRMKDYEEGEYGLAEAVQEIKLGKKQIALRERNIEQLTQN
VNKAEIQLNELLEENEELRSRLGFDPKQPIDMEQARLYRGQQHQQDRALNQVLAKEVERL
EEERVSLKKQIRSLATQRAQRGVALGLTADEMLAVDDFAEELKNSRKPGSGPSKIAEAIK
DKGLGPSDSVRVRTHQLEQEVARSEQAMERLRTQLTEMKAENKKLTDDNQRVEKSMKEIL
QVLKEGQAGGGGGGAVDPEILGPTLERLCLLFESKDSKEAYEAQVYLKAQVDQLTGRNEE
LRRELRQARNEAEKTSVALDRAETKITRLQQDLKDLRDLGQGAGVMTLHQTALPQGLAVS
SAEIIASLNEQLVHALQELSVREDQLGKCETALQTYRRRFAVLRHQQGLLYQEYQEKVDG
WQQQEKSWKEEKQKLMESAEDHEARQQEFNRLLESLEANGDEQQRRLAESTRKVTVLRVN
EKALTRRFTSCQEGEATLRKEVNKLRNEMVQMESAITERMGYLQRHKEASQFKVAALQRV
LDDSVPASELASANRQYNELAAKYRDLLQTDNQLVTRNTRIDQLEGENQRLEDDLDNLKR
ELTMEKEKLHTLEQAMQDYGNLQEALGKKSGSVYPGSETLSLAKRLTTMEMKELNERQRA
EHAVRMQNQMRNSLHTMEMRNTELEQKFADLTKLNLELQRSEQELRDELSQCVTKAASDI
DKRNISELERSTAALRNENDKLKEMVDVASFQSKALEAQQVSRDKEVQSLRQQLLDIQTQ
SDEKAIIGKLHHHIVALQVSEGTAVRKLEAATMKNRQLEAKVLRLEKQLDEKAQSLYHCQ
VDSRNKARHLRRTVQGLRRQFSGAVPLEEQEKFSKAMIQLRLDKERMEKEMKVLKHEREK
VSEQFADLELKHSGLQELMQTLKDSRGAAKVAEWHAKMQETRLQDMKLNRQITRLQQQVK
YFENMVTTHEQTVASLEQENVHINRQAEERQLLWEQREAELERMIDNLEKQQREIADAAV
KFEEVTGSLPDPSLPVANQLEYSIRTIKTHVKTILDSRAEIKALQKKLTEKEKSLAETES
NLLARDRVINELRMRLPASSDRDEVIKDAMSEGVRFKEIHETCEHKQALKVAQTQIEGLQ
NRIQQKEEALQKYIELLEQSRKESADESGKYMSEIHDLQLKLHAQNDLAFNKFKKAAMDL
ANKPTPPVPGSREFARLQELEDLVAQQDNALAAMSVKLKAAHTEVAKWKDVLNRKTKDFQ
RKTEKLTAEHNTQTRKLESEISNHLETIKDKEAEIERLETELEQQRAANSKAPTTTMKNM
VDRLKNELSLKEKQHKSLSQALLQLRADMVDTAQQNAKAQASEQEQQINVQKLIEKETKK
MKDVLEETQGRLDQARREVKKFKGQVSGLTKELDEVKEELVKKTKKVSKVESERDDLDRE
VEVLKLQTTQQEPERDVGDIDEVSALKRKIRHLEAQLISSKKMTETGSKKEQSAVEVAKW
EESKKWEKRLESLKAKLREKDKEIEQLQKSNKMMKEALNRNERQKSSVRGETLKKPAAEE
TSSGMLADMEDLRRKNHRLEEEISSLRRQQALGHGSVVQDLQQKNLFLNEKLDSLQRRLD
ISERERITATDEVRTSASAPGLRSAERETELQRQLLEVSQENLELRFEAEQAKRDVPRLK
QRVDDLERYNEALKSDLEKERKKSRAAASKLASTSSSGITKKGSSGKSIPELERTVGLMK
KVVERVQQENEQLKKAPGVTTQTEIHTLKNQNKELKEELAKMKHQVGGQLSTRYESTQKG
VAKAMAENERLRQQLQREVDSGQRMRGNLAEVTTDKNRLQRQLDEIQEKLTIEQARGPKL
EGADSKSWKSIVVTRMYEEKMRSMEKDLEKKNGVISDMKQLLKDSAHREQLMITEMGELK
EKINILERFPVEGSGMEGDVFQQLQQTRLTNHRLENEKAELLNELKLFRLKGASKGESTT
MQDDELVERLHNYNSVMEDNVRIRMELQTMELDKERLRKENDKLRKELEQFDPSFFEEIE
DLKFNYREVVQRNVQYEEELRNLGQQFGIQVNIPP
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatcgactgggacaagatcatggacgtggagagtacagagatgtcggacgag
ctggctgatgagctctttgaagagttagctgatgttgacaaggctgatgcgaaagataat
gaccaatggcagcagctgtttgacgtgaccagggctatcatgatgatgaaggcagcccag
gctaacgttgccctggaagagcttgagcagctagccacgcagcaggggaaggagggtgtt
atcaatgagcaaggattgattgatcagatcagggaactagaggaggagaataagaggtta
cagcgcatgggtggatctggcggatctcgggacacccgtcagctccagaatgaggtccat
gaactgagccgacaggtggatctgattcagagggagctgaaggagaaggagagggatctt
tacaaggagaagactgaatcagagagactccacacaagagcagaggatgcggaaaaggat
gttagagatatcaagcgagagaatgatgcccttcgtcaggatctgcgtgattaccagcgt
cagatggaatctcagcgcgagagtctcaggatgcgccgcggggacgacgtggagtaccag
gacaagatccgccagaagaaccgtgagattaaccaacaactggaggaaatcaagaatttg
acagataacaacgagctcctaaatgagaatatgaaggacatggaaaagaagctgaaggat
gccgccgaggagatggatgcgattgctgaggactacgtcaagatcaagaaactatccgga
caatctgactctaaagcgacccgtctcaagcatgaaaatgatgtccttaaagaacagatc
aaagagttatctgaaaagcttcagaatcagatacaaggtgacgatgaggtcatgactgaa
cttaatagcaaggtggaggtgtggaagtctgcactggaagtgaaagacagggagatcgac
cgtctcaacctgatcatacagcagcagaaggaccagttaacagccagtgagattgatacc
gacaagacatcagtggttgctctctcaaaggctttacaagagaaggaggctcagttgacc
attctgagacagcagctcgaggagtcagcaagggagatggacgagagagccgaggagctt
gagatgctgaagaatgatgctgccagtggggctgctccaactgtgcgtcttcagaacatg
gttaccaaattgcgagagacgctgaaggagcaggagaaagagatgaaagcggcggaggag
agggttctgcaagctgagaccgatgcaagaaagaaagacaaagaattgaacgaagccatt
aacaggatgaaggattatgaagagggagaatatggattagctgaagccgtgcaagagatt
aaacttggcaagaaacagattgcattgagagaaagaaacatcgagcagctgacgcagaat
gtcaacaaagccgagatccagctgaacgaactcctcgaagagaacgaagaattgagaagc
aggctggggttcgatcccaagcagcccatcgatatggaacaagctcgtctctatagaggg
cagcagcatcaacaggacagggcactgaatcaggttttggctaaagaagtagagagactg
gaagaggaaagggtttctctcaagaaacagatcagatccttggcaactcaaagagcacag
aggggtgttgctctaggtctcactgcggatgagatgctggctgtcgatgactttgcggag
gaactgaagaatagtcggaaacctggtagcggtccttccaagattgccgaagccatcaaa
gacaagggccttggaccgtcggattctgttcgtgtcaggacccaccagctggagcaggaa
gtggcccgctcggagcaagccatggagcgcttacggacccagctgaccgaaatgaaagcg
gagaacaagaagctgaccgacgacaaccagagggtggagaagagcatgaaggagattctc
caagttctcaaggaaggacaggcaggaggaggaggcggaggagcagtggatccagagatc
ctgggaccaacccttgagaggttatgtcttctgtttgaatcgaaagactccaaggaggca
tatgaagcccaggtgtacctgaaggcgcaagtcgatcaactcaccggaagaaacgaggaa
cttagaagagaactcagacaggctaggaatgaagcagagaaaaccagcgtggctcttgac
agagctgagacaaagattacaaggttgcagcaagacttgaaggaccttcgtgacctgggt
caaggggcaggggtcatgacccttcatcaaacagctctaccgcaaggtctggctgtgtcc
agtgcagagatcatcgcatctctgaatgagcaacttgttcatgcattgcaggagttgtct
gttagggaagaccagctagggaagtgtgagacagctcttcagacgtaccgaagacggttt
gcagtgctgcgacatcaacaaggcttgctctatcaggaataccaagagaaggttgatggt
tggcagcagcaagagaaatcttggaaggaagagaagcagaagctcatggaaagtgccgag
gatcatgaagctagacaacaagaatttaatcgtctgttagaatctttagaagctaacggt
gacgagcagcagaggagacttgcagagtcgactaggaaggtcactgtattgagggtgaat
gagaaagcactgaccaggcgcttcacgtcctgccaagagggggaggctacactaaggaag
gaagtgaataagcttcgtaatgagatggtacagatggagagcgccatcacagagagaatg
ggatatcttcaacgccataaggaggcatcccagttcaaggttgccgctttgcagagggtt
cttgatgacagcgtgcctgcttcagagttagcctccgccaacaggcagtacaatgaatta
gctgccaagtacagagacttgctgcagacggacaatcagttggttactagaaacactcgc
attgaccagctggagggggagaaccaaagacttgaagatgatcttgacaatctgaagaga
gaactcacgatggagaaagagaaactacacaccctagagcaagcaatgcaggattacgga
aacttacaagaggctcttgggaagaaaagtgggagtgtctaccctgggagcgagacgctc
tcattggctaagaggctgactaccatggagatgaaggagttgaacgagaggcagagggcg
gagcatgccgtcaggatgcagaaccagatgaggaacagcctgcatacgatggagatgagg
aacacagagctggagcagaagtttgctgatttgacgaagcttaaccttgagttgcagcgc
agtgaacaggagctgagagacgaactatcgcagtgcgtcaccaaagcagctagtgacatc
gacaagagaaatatcagtgagctggaaagatcgacagctgcactaagaaatgaaaatgat
aagctgaaggaaatggtagatgttgcctctttccagtccaaggccttggaagcacagcag
gtctcaagagacaaggaggtccaatcgctacggcaacaactcctggacatacagacccag
agtgatgagaaggccattataggaaagcttcaccatcacatcgttgcccttcaggttagc
gagggtacggcggtcaggaagctggaggctgctaccatgaagaacagacaattagaagca
aaggttctaagattagaaaagcagcttgatgagaaagcgcagagtctctaccattgccag
gtcgactcgaggaataaggcgaggcatctgaggagaaccgttcaaggtctgagaagacag
ttcagtggagccgttcccctggaagaacaggaaaagttttcaaaagccatgatccaactc
aggctggacaaggagaggatggaaaaagaaatgaaagttctcaagcatgagagagagaag
gtctctgagcagttcgccgacctcgagctgaaacactctggactgcaggaactcatgcag
actctcaaggacagcaggggagcagcgaaagtggcagagtggcacgctaaaatgcaagag
accagactccaagatatgaaactcaatagacagattaccaggctacagcagcaggtgaag
tattttgagaacatggtgacgacccacgagcagaccgttgcgagcctggagcaggagaac
gtccacatcaacaggcaggccgaggagagacagttgctgtgggagcaaagagaggcggag
cttgaaaggatgattgacaacctggagaagcaacagagagagattgctgatgctgcggtc
aagtttgaggaggtgacaggctcgttaccagaccctagtcttcctgtagccaatcagctg
gagtattccatccggaccatcaagacccatgttaagactatcctagactcaagggcagag
atcaaggcactgcaaaagaaactgacagagaaggagaagagccttgccgagacggagagc
aatctcctcgccagagaccgagtgatcaacgagctgagaatgagactaccggcgtcgtca
gaccgggacgaggtcatcaaggatgctatgtcagaaggggtccgcttcaaggagatccac
gagacgtgtgaacacaagcaggcgctgaaagtcgcccagacccagatagaaggtctacag
aatcgcatacagcaaaaggaggaagctttgcaaaagtacattgaacttttggaacaatca
agaaaggaatctgctgacgagagcggaaaatatatgtcagagatacatgatcttcaactc
aagttacacgctcagaatgatcttgcatttaataagttcaagaaggctgctatggaccta
gcaaacaagcctactccaccagtccctggcagcagggagtttgcccgactgcaggagttg
gaagacctggttgcccagcaggataatgcccttgctgctatgtcagtaaagctcaaggct
gcgcatacagaggtggcgaaatggaaggatgtcctcaacaggaagaccaaggactttcag
aggaaaactgaaaagctcactgcagagcacaacacacagaccaggaagctagaatctgag
atctccaatcatctcgagacaatcaaagacaaagaggccgagattgaacgcttggagacg
gagcttgaacaacagagggcggcaaactccaaggcccctacgaccaccatgaagaacatg
gttgatcggttgaagaatgaactctctctcaaggagaagcagcataagtcgctcagccag
gcattgctgcagctacgtgcagacatggtagacacggcccagcagaacgcaaaggctcag
gcttcggagcaggaacaacagatcaacgtccagaagctgattgagaaggaaaccaagaag
atgaaagatgtcttggaggagacccaaggccgacttgaccaggctcgaagagaggtcaag
aagttcaagggtcaggtgtccggtctgacaaaagaactggatgaggtcaaagaggagtta
gtaaagaagacaaagaaagtttccaaggtggagtcagagagagatgatctggacagagaa
gttgaggttttgaagcttcaaacaacacaacaggaaccagagagggatgtgggagatatt
gacgaagtatccgctttgaagaggaagatccgccatcttgaagctcagctcatcagcagc
aagaaaatgacagagacgggcagtaagaaggaacagtcggctgtggaggtagcgaaatgg
gaggaaagcaagaaatgggaaaagagattagaatctttgaaggctaaactcagggaaaag
gataaagaaattgaacagctgcagaaaagcaataagatgatgaaggaagccctcaatagg
aatgagaggcagaaatcaagtgtccggggtgaaaccctcaagaaacctgcagcagaggaa
acctcatccggaatgctggcggacatggaagacctgagacggaagaaccatcgcttggaa
gaagagatctcttccctccggagacagcaagccctgggccatggttcggtagtccaggac
ctgcaacagaagaacctgttcctgaatgagaagctagatagccttcagaggagactcgat
atatctgaaagagaaagaatcactgcaacagatgaagtcagaacatcggccagtgctcct
ggactcagatcggccgagagggagacggagctccagcgtcaactccttgaagtgtcgcag
gagaacctggagctgcggttcgaggcggagcaggccaaacgggacgtcccccgactgaaa
cagagggtggatgatctggagaggtacaacgaagctctgaagtctgaccttgagaaggaa
agaaagaagagcagagcagcagccagtaaacttgccagtacctcgagcagtggaattacc
aagaagggatcaagcggaaagtccatcccagagctcgagaggaccgtcgggctgatgaaa
aaggttgtagagagagttcagcaagagaatgaacagctgaagaaggctcccggcgtcacc
actcaaacagagatacatacactcaagaatcaaaacaaagaattaaaggaggaactcgca
aagatgaagcaccaggtcggaggtcagctctccacccgatacgagagcactcagaagggt
gtggccaaggccatggcagagaatgaaagacttcggcaacagcttcaaagagaggtggac
tcgggtcagcggatgaggggcaacctggcagaggtcacgacggacaagaacagattgcag
aggcaactggatgagatccaagagaaactcactatagagcaggcgagagggccaaagttg
gaaggggcagacagtaagagctggaagtcgatcgtcgtgactcggatgtatgaagaaaag
atgaggagcatggaaaaggacttagagaaaaagaacggcgttatatctgatatgaagcag
cttctgaaggattccgcacatagggaacaattgatgatcacagagatgggagaactgaaa
gagaagattaacatcttagagcgattcccggtggaaggtagcgggatggaaggtgacgtg
ttccagcaactccaacagacaagattaaccaatcacagactggagaatgagaaagcagag
cttcttaatgaactaaaactatttcgcctgaagggggcgtccaagggtgaatcaaccact
atgcaggatgatgagttagtggaacggctccataactataactcggtgatggaggataat
gtaaggatccgcatggagctacagactatggagctagataaggagaggctccgcaaggag
aatgataagctgcggaaagagctggagcagtttgacccgtctttctttgaggaaatcgag
gatctgaaattcaactaccgagaggtggtacagaggaacgtgcaatatgaagaagaactg
agaaatttaggtcaacagtttggtattcaagtcaatatacccccttga
DBGET
integrated database retrieval system
