KEGG   Lytechinus variegatus (green sea urchin): 121407341
Entry
121407341         CDS       T11173                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121407341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lvg03019]
    121407341
   03041 Spliceosome [BR:lvg03041]
    121407341
   03032 DNA replication proteins [BR:lvg03032]
    121407341
Messenger RNA biogenesis [BR:lvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     121407341
Spliceosome [BR:lvg03041]
 Complex A
  U1 snRNP components
   Sm proteins
    121407341
  U2 snRNP components
    121407341
 Complex B
  U1 snRNP components
    121407341
  U4/U6.U5 tri-snRNP components
    121407341
 Complex C
  U2 snRNP components
    121407341
DNA replication proteins [BR:lvg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     121407341
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 121407341
NCBI-ProteinID: XP_041454313
LinkDB
Position
2:complement(12129976..12137927)
AA seq 214 aa
MVVGRTSKMVQYINYRMRVNLQDGRTFIGTFLAFDKHMNIVLGDCEEFRKLRAKSAKAPA
KEEKRVLGLVLLRGEHLVSMTVEGPAKDSGPRVPMPGGGGGPGMARAAGRGIPAASASMS
APAGLSGPVRGVGGPSQSHMAPMGGPGGFPPRGPPRGPPGMGPPGMGPPGMGPPGGFRGG
PPMGRGMPPMGGYGTAPWHERSTKELVLNIINVL
NT seq 645 nt   +upstreamnt  +downstreamnt
atggtggtgggcaggacatcaaagatggtacagtacatcaactacaggatgagggtcaac
ctgcaggatggacgcacattcattggtacattccttgcctttgacaaacacatgaacatt
gttcttggtgactgtgaagagttcagaaagcttagagccaagagtgccaaggcccctgcc
aaagaggagaagagagtacttggcctggtcctgcttcgaggagaacatctcgtttccatg
acagtagaaggaccagcaaaagactcaggtccaagagtacctatgcctggtggtggaggt
ggacctggtatggcccgtgctgctggacgtggtatcccagcagcttctgcctcgatgtca
gcaccagcaggactgtctggacccgtcaggggggtcggcggcccatcacaatcacacatg
gctcctatgggtggaccaggaggcttcccaccaaggggaccaccaagaggacctccaggt
atgggaccacctggcatgggaccgcccggtatgggaccaccaggaggattccgaggaggg
ccacctatgggacgaggaatgcccccaatgggggggtatgggaccgccccctggcatgag
aggtccaccaaggaattagtgttgaacatcatcaatgttttgtaa

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