Lytechinus variegatus (green sea urchin): 121407399
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Entry
121407399 CDS
T11173
Name
(RefSeq) sodium-dependent noradrenaline transporter-like isoform X1
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121407399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121407399
Transporters [BR:
lvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121407399
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF8005
Motif
Other DBs
NCBI-GeneID:
121407399
NCBI-ProteinID:
XP_041454387
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Position
2:complement(14645352..14695398)
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AA seq
736 aa
AA seq
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MEGEEDVSGIRFLVRRNLKAANEQGVFLLAVRNGKGLVVQVRQPNTINMETKPIANGVAP
SEDVTDHGNSNSHPDIVEVGIDNPTVDLGDEVPISVHIIRPEEAGIAPVVNHDSMPNNNF
MKDGYANDPSATELLNDTKVVEMEMEDRTRLPVKEEYETNNDKEDDEERETWGRKIDFLL
SVIGFSVDLANVWRFPYLVYRNGGGAFLIPYVLFLLIGGMPMLYMELALGQYNRGGAISV
WKICPIFQGVGWAVLVIAWYVGFSYNVVIAWSFYYLFASFTGELPWTYCNKDWNTPYCFD
DSMNASYVEIDGATVWLNASTGTTPAKEYFDLEMLRRDRSSGLFDLAGMSWPLPLCLILV
FITLYFSIWKGVKTSGKVVWVTATLPYFVLTILLIRGVTLPGSGDGIRYYLYPDFNLLAQ
PTVWIDAAVQIFYSIGAGFGVHIAFASYNKFHGNVYRDAIFTSSINCFTSFFSGFAVFSI
LGYLSFKTGKDISEVATEGPGLVFTVYPEAIATIPGAPFWSIIFYIMLITLGLDSSFGGT
EAIITGLIDQFPKFFKNRREYLVLAVVVSFFFFTLFNVTYGGIYIFHLENEYAASTSLLF
VVAIQVFAVAWIYGVRRFSQDIQEMIGSLPSIVWRICWKFVSPTFVFVMFIVSMVLSEPL
TYEEYVYPDWGNVLAWLFAASSMVIVPLGVIWQLIVAPGSGLKEKFAYAITPRAEHDLIR
EKGEITRFKAKHWLSL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaagaggatgttagcgggattcgattcttggtcaggaggaacctcaaggct
gcgaacgaacaaggagtgttcttactcgccgtcaggaatggcaaaggtttagtcgtgcag
gttcgccagccgaacaccatcaacatggagaccaaacccatcgccaatggcgtcgctccc
tccgaggacgtcactgaccacggcaactcgaattcccatcccgacatcgtcgaagtcggc
atcgacaacccgacggtcgatctcggcgacgaggtgcccatctcggttcacatcatccgc
cccgaagaagccggcatcgccccggtagtcaaccacgacagcatgcctaataacaatttc
atgaaggatggctatgccaatgacccctccgccaccgaactcctcaacgacaccaaagtg
gtggagatggagatggaggatcggacaagactgccagttaaagaggaatatgaaacgaac
aatgataaggaggacgacgaggagagagaaacgtggggaaggaaaattgattttctttta
tctgtcatcggtttttcagtcgatttagcgaatgtctggaggtttccatatttagtatac
aggaacgggggaggagcgttcctcataccatacgtattgtttctgctgatcggtggaatg
cccatgctgtacatggagctggcactcggacagtataacagagggggagctattagtgtt
tggaagatctgtccaatttttcaaggagttggttgggcagttctggtcatcgcatggtac
gtcggcttctcgtacaacgtggtgattgcatggtccttctactacctcttcgctagcttc
accggtgagcttccgtggacatactgtaacaaagactggaacacgccctattgtttcgac
gattccatgaatgcatcgtatgtggagattgacggcgccacggtgtggctgaatgcctcc
accggtaccacaccagccaaggaatactttgatctggagatgctccgtagggataggagt
agtggtttatttgatctagctggtatgtcatggccactgcctctctgtctcattctcgtc
ttcattaccttgtatttctccatatggaaaggagttaagacttctggaaaggttgtatgg
gtgacggctacgctcccgtactttgttctcactattctgctcatccgtggtgtcaccctc
cccgggtctggggatggcatcagatattatctctacccagattttaatctcctcgcccaa
cccacggtgtggatcgatgctgcggtgcagatcttttattcaattggagctggtttcggc
gtacatattgcctttgccagctacaacaaattccatggtaatgtttatagagatgctatt
tttacgagttctatcaactgcttcacgagtttcttttccggatttgctgtcttttcgatt
ctcggttatctgtctttcaaaaccggtaaagacatatcagaagtagcaacggaaggtcct
ggactggtgtttacagtttacccagaagccattgcgacgatacccggtgcgccattttgg
tccattatcttttatatcatgctaatcacacttgggcttgatagttccttcggtgggacg
gaagccatcatcaccggtttgatagaccagttcccaaaattcttcaagaacagaagagag
tacctggtcctcgccgttgtcgtatcgttcttcttcttcactctcttcaatgtcacgtac
ggtggcatatacatctttcatttggagaacgagtacgcagcgtcgacatcgcttctcttc
gtggtcgcaatacaggtttttgctgtagcctggatttatggggttcggcggttctctcag
gatatccaagaaatgatcgggtctttacccagcatcgtctggaggatctgctggaaattc
gtctcaccaacctttgtattcgtgatgtttatagtaagcatggtgttatcggagcctcta
acttacgaagaatatgtttaccctgattggggtaatgtattagcatggttattcgcagca
tcatcgatggtgatagtcccccttggtgtcatctggcagctgatagtggccccaggatcg
ggattaaaagagaaattcgcctacgctatcacaccacgtgcagaacatgacctgataaga
gagaagggagaaattactagatttaaggctaaacattggctgtctctatag
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