Lytechinus variegatus (green sea urchin): 121411330
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Entry
121411330 CDS
T11173
Name
(RefSeq) inner nuclear membrane protein Man1-like
KO
K19410
inner nuclear membrane protein Man1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121411330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121411330
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121411330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
TMEM208_SND2
CTLH_Armc9
DUF5342
Motif
Other DBs
NCBI-GeneID:
121411330
NCBI-ProteinID:
XP_041459928
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All DBs
Position
3:complement(52542786..52565803)
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AA seq
927 aa
AA seq
DB search
MAARGDPPLTDSQLREELISYGYTPGPITGTTRSLFLKKLDKLRIEKKNITTKAASRKVS
SPKVFALSSDESEGEAVGNSRVTAPVSATRRRSGARVARPAPKTKRNSVGVKNSQSARKT
SSRRSLGVGINDHEVEDDVNDDGSEKSDRGHEYQHRNDRDFRGGPSTNDVSNSRTVKGRR
RSIRQGRGAGDSNSNRVNGEQLGDTTVTSSTASTSRRGEFSDSDEELFDKGVKTRTKKQP
TVARTSESYKFSKVKSKPGVIVHDEEGDDDDEYVEEDEDDSASDNSGKRNTFVVNSSKDG
SRKEDSRRGRWNFLSGSYKSKTDSPPRITSNTSRSKDTDTSSNWTFFTSPFNSSRTSTPR
KASSSRDDTTYHSINPGNSFQQDAPASAAATPVSGRPTLRGSTLDASSSNHASFHGQTPT
PMSSGFRQDYSTPAPNENRFETNAQTPLREQSLDEAQIFATEENLGSSWRTQYSHFVSKV
LLGSVCLFFIMLGLMYLSVNSTVKSRYLQIADITGGDDVDFSGDELPLLMGQALHEKLSE
IRGDFLCGKSPVKNMTMEEAKIYLEEYPSIQKRTPRSNPFWVSEYMPRTLFLITSNPQWS
IRLFDKENEHLTEYRYDNDVKWLESTHEYMTLFCQVKTTAIKLLFWATILVISLLVLWPG
FYLIKYQMQRKEQARQEVTQLVEKIIEVLANHQQACYQDKSLTPYLAIPHVRDTLIPPAE
RHKKQHLWQKAVQFLNVNESRVRVETQQVAGEEFAVWRWVQPSPAVAVTSFVPITDRDMN
PKRAKVWQGTAFASLDSAVKASAYNYTPCLKVRNMFDPTLESGSNWHLTIQDAILERCGD
DSGIMHIAVEKTSREGCVYVKCVSSEKAGIAFRCLQGSWFDGKLVTVKYIRLDRYHQRFP
SALNVTSLLKPSNNLRMSLQSPPSSPS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaggggagatcctccgttgaccgacagtcagctccgtgaagagttgatttcg
tatggatacacgccaggtccgataacaggaaccactagatctttgtttctgaagaagctc
gacaaacttagaattgagaagaagaacattactacaaaagcagcttccagaaaggtttca
tcgcccaaggtattcgcattgagttcggatgaaagcgaaggagaggctgtgggaaattcc
agggtaactgccccggtcagtgcaactagacgccgcagtggtgcacgggttgcgcggcca
gcgcccaaaacaaagcgcaattcagttggtgttaaaaattctcaaagtgcacgaaagaca
agttcgagaaggtctttaggagttggtataaatgaccatgaggttgaggatgacgtcaat
gatgatgggagtgaaaaaagtgatcgtggacatgaatatcaacatcggaatgacagagac
tttcgtggtggaccgtcaacgaatgatgtttctaattcaagaacggtaaagggtaggaga
aggtcgatcaggcaaggaagaggtgcaggggacagtaattcgaacagagttaatggtgaa
caactcggtgacactactgtcactagtagtactgctagtactagtagaaggggagagttc
tcggactctgatgaggaattgtttgataaaggtgtaaaaacaagaacaaagaaacaaccg
actgttgctagaacttctgaatcttataagttttccaaagttaaatctaaaccaggtgtg
attgttcatgatgaggagggggatgatgatgatgaatatgttgaagaagatgaagatgac
tctgctagtgataattcagggaaaaggaacacgtttgttgttaattcgtcaaaagatgga
tctcgtaaagaagacagcaggagagggaggtggaattttctctctggttcatataaatca
aagacagattcaccacctcgcatcacatcaaatacttcaagatctaaggacacggataca
tcttcaaactggacatttttcacttctccgttcaattcatctcgtacatcgactcctaga
aaagccagctcaagcagagatgatacaacctaccactccatcaaccctgggaactcattt
caacaggatgccccagcaagtgctgcagcaactcctgtcagtggtaggccaactttgaga
ggctccacattagatgcatcatctagcaaccatgcatcatttcatgggcaaacaccaaca
ccgatgagcagcggctttagacaagactactctacaccagcaccaaatgaaaataggttt
gagaccaatgctcagactccactcagggaacagtcactggatgaggctcagatatttgct
acagaagagaatcttggttctagttggagaactcaatacagtcattttgtttctaaagtg
cttcttgggagtgtctgcctgttcttcatcatgcttgggctgatgtacttgagtgtcaac
agtactgtgaaatccagatatttgcaaattgctgacattacaggtggagatgatgtggat
ttttctggtgatgagctaccactgctgatgggacaggccttgcatgaaaaactgagtgaa
ataagaggtgatttcctgtgtggtaaatcccctgtaaagaatatgacgatggaagaagct
aagatttatttagaggaatatccctccattcaaaaacgtacaccaagaagcaatccattt
tgggtgtcagagtacatgcccagaactcttttccttattacttcaaatccacaatggagt
ataaggctgtttgataaagagaacgaacatctgacagaatacaggtatgataacgatgtg
aagtggctggaatctactcatgaatacatgaccttattctgtcaggtcaagactacagca
atcaaacttctcttctgggctaccatcctcgttatctctcttttggtattgtggccaggt
ttctatcttataaagtaccagatgcagaggaaagaacaggcacggcaagaagtcactcag
cttgtagaaaagattattgaggtccttgctaaccaccaacaagcctgctaccaagacaag
agtttgacaccatacctagctattcctcatgtcagagacacactgatccctccagctgaa
agacataagaagcagcacctgtggcagaaggctgtacagttcctgaacgtcaatgaatct
cgtgtgagagtagagacacagcaggttgctggtgaagagtttgctgtatggaggtgggtt
caaccgtctcctgctgtggctgtcacatcgtttgtacccatcactgatagggatatgaat
cccaaaagagcaaaggtgtggcaaggaacagcttttgcaagcctggatagtgcagtgaaa
gccagtgcctataactacactccgtgcctcaaagtcagaaatatgtttgatcctacactg
gagtctggaagcaactggcatttgaccatacaggatgctatcttagagagatgtggggat
gacagtggtatcatgcacattgctgtcgagaagacttctagagagggatgtgtctatgtg
aagtgtgtttcttcagagaaggcaggcatagcattccggtgccttcaaggaagctggttt
gatggtaagcttgtgacagtcaaatacattcgacttgaccgataccatcagcgtttccca
tcagctcttaatgtgacatcattgctgaaaccttccaacaatctccgtatgtcactccag
tcgcctcccagctcacccagctga
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