Lytechinus variegatus (green sea urchin): 121413295
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Entry
121413295 CDS
T11173
Name
(RefSeq) baculoviral IAP repeat-containing protein 3-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121413295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121413295
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121413295
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121413295
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121413295
Peptidases and inhibitors [BR:
lvg01002
]
Peptidase inhibitors
Family I32: IAP family
121413295
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121413295
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121413295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
121413295
NCBI-ProteinID:
XP_041462002
LinkDB
All DBs
Position
4:8190011..8210309
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AA seq
792 aa
AA seq
DB search
MSTDVCLQFNGQRQSLTSILCEIKPDLYTMKEGLEIMELHKKFYDEADCHGPASMHSSEP
RTLPDGRICMEKLGSRGSSSGMNKETNRLATFQNWPENSPVNYQHLARAGFYFTGLRDVV
KCFFCGGEVEGWEYGDTAMGEHKKHFPTCEFVNGRTTSNISLLELNERPEFERKLSSKIE
QSQRDIERRAKEKEAMLERSDPSEMKKDLVRPNSASSSFSAMSEQMEEEEESPATLFGKY
NQEHVRLQSFKNWPRTSPIEPRDLAKAGFYYVGQDDSVQCFACFGQISRWKPCDVPAVEH
KTHFPNCPFVQGLDVGNLPISTPPVMHVGMAPPIRSYSTPGPSPDQLRAGQFLQQQRNLR
ASKEPLNNCKHPNFVQEAARLGTFRNWPGKLGYHHVTPRVLAKAGFYYTGLVDECKCFYC
DGGLKNWEPTDEPWTEHAKWFPRCEWLIQQRGQAFITHVQQVNPPPISSGYKTTTQVKNE
PDYAETDHHYYVQPLSFHDPPIGREEPYSQVQPPHSFQTSYQERQPLPSPPLTRSNKEMT
IEEEKEAALREYESRHREPEAAAEFNFRPKTKKLEEAEPSDLKSKLADEMSNTASSIDNF
MESPTAQMAVEMGYHNDLIRYVVTKHFKKTGKQFSSADDLLESIWEAQGQGIDPTLSVGK
AVGGQDVDYLRKPPKELESAAARPSSIVEIQALKLAGLSIHDDDEPPPRRNPSPKTVAPA
THIGSLKPQTSVSSSESSVLDKQLCKICLDNELSTVFLPCKHLATCSECAARVTECPMCR
QPIIDSLTVYMP
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgatgtgtgtctacagttcaatggccagagacagtcattgacgtctatcctc
tgtgaaattaaacctgatttatacaccatgaaagagggtttggaaatcatggaacttcat
aaaaagttttatgatgaagccgactgtcacggacctgcgtctatgcattctagtgaaccc
aggactcttccggacggaaggatttgcatggagaaattgggaagtagaggctctagtagt
ggaatgaacaaagaaaccaataggctggcaacgtttcagaactggccagaaaactctcct
gtgaattatcaacatcttgcaagggcagggttttactttactggtttgagggatgtagtg
aaatgcttcttttgtggaggtgaagtagaaggatgggaatatggggacacagctatgggg
gaacataaaaaacactttccaacttgtgaatttgtaaatgggaggactactagcaatata
tcgttattggagttgaatgagagaccggagtttgaaaggaaactgagcagtaagattgaa
cagtcacaaagagatattgaaagacgagcaaaggaaaaagaagcaatgctagaaagaagt
gaccctagtgaaatgaaaaaagatttagtaaggcctaattctgcaagcagtagtttttca
gcaatgagtgaacaaatggaagaggaggaagaatcaccagctacattgtttggaaaatac
aaccaggaacatgttcgtttgcagtcatttaaaaattggcctaggacgagtcccatagag
ccaagagatttagccaaggctggattttactatgttgggcaggatgattctgttcaatgt
tttgcttgttttggtcaaataagtagatggaaaccatgtgatgtacctgcagtagaacac
aaaacacatttcccaaactgcccttttgtgcaaggtttggatgtagggaatttacctatt
tcaactccaccagtgatgcatgtgggtatggcgccgccaatccgtagttactcgacgcct
ggacccagtccagatcagttaagagctggtcaatttctgcagcagcaaaggaaccttagg
gcgtctaaggaaccattgaataattgcaaacatcctaattttgtgcaggaagctgcaagg
ttaggaacctttaggaattggccaggaaagcttggctatcatcatgtgactccacgtgtt
cttgccaaggctgggttctattacacaggattagttgatgagtgtaaatgcttctactgt
gatggagggctcaagaactgggaacccacagatgaaccatggacggaacatgccaaatgg
tttccaagatgtgaatggcttattcaacaacgagggcaggcttttattactcacgtgcag
caggtcaaccctccacctatcagctcaggctataaaactacaacccaagtcaagaatgag
ccggattatgctgagacagatcatcattattatgttcagcctctatcgttccatgatcct
cctattggaagagaagagccatactctcaagtccaaccaccacacagctttcaaacttca
taccaagaaagacaacctctaccctctccacccttgaccaggtcaaacaaagagatgacc
attgaggaagagaaagaagcagctttgagggaatatgaatccaggcacagagaaccagaa
gctgcagctgaattcaatttcagaccgaagacaaagaagcttgaggaagcagaaccatct
gatttgaaatcaaagcttgcagatgagatgagtaatactgcttcgtccattgataatttt
atggagagccctacagctcagatggctgttgagatgggttaccacaatgatctgatccgc
tatgtcgtaaccaaacacttcaagaagactggaaagcaattctcatcagctgatgatctt
cttgaatcaatctgggaagcacaaggtcaagggattgatcctactctatctgtaggcaag
gctgtaggaggtcaggatgtagattaccttaggaaaccacccaaggagctagagagtgcc
gcagcaaggccatcaagcattgtcgaaattcaggcattgaaacttgctggattgagcatc
catgatgatgatgagccacctccaagaagaaacccatctcctaaaactgttgcaccggct
actcatattgggagcctgaaaccacaaacttctgtatccagttctgagtcgagtgttctt
gataagcagctttgcaagatctgtttggataatgaactcagtactgtattcctgccatgt
aaacatcttgctacatgtagtgagtgtgcagcaagggttactgagtgccctatgtgtaga
caaccaatcattgattcattaacagtttacatgccatga
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