Lytechinus variegatus (green sea urchin): 121414003
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Entry
121414003 CDS
T11173
Name
(RefSeq) runt-related transcription factor 1-like
KO
K09278
runt-related transcription factor 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121414003
Transcription factors [BR:
lvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
121414003
BRITE hierarchy
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GFIT
Motif
Pfam:
Runt
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
121414003
NCBI-ProteinID:
XP_041462972
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Position
4:38385953..38441198
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AA seq
535 aa
AA seq
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MHITDVEHLLSSTAPLANQPSKDPVRRNNIHNNYKMAEGGQRNKASSVFKGGERSLVDAL
SEYPGELVKTESPNFACSVLPSHWRCNKSLPVAFKVVSLGETKDGTMVTIAAGNDENYCA
ELKNNTAVMKNQVARFNDLRFVGRSGRGKSFTLSIFIYTNPPQIATYNRAIKVTVDGPRE
PRRPKPKDQESRLMPPPIINTGHTHPFGEISPHHPNHHIGRQQSFQNQSRMPRSYPLSPT
SGSYDNIQHQGQASKPWSYYNPYPTTVAQPSDSSILTPQIKTEPTDLALLGQQNSTLQQY
PKPDSIYPTSITRASEVQDSRFVYPSAQAVSSTSYTPSSMSVLSSGGDSPRTILPMTPNP
FPLSSQDIFSSSTTTPVTLTSPPYLPNSPPYHLYPHLYMSSPSSQTYYDGSHIPMLPSTR
PDEKQEIKQDNRPRDVGGETISQIPHPSAEMSLTVALNYGSHPQSQIELNTARTMGQSMG
MQNSGVALMQQHRNNSPVTNISPMQQGMGQMNINTTVGHLPTVDDSRKEDVWRPY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcatattactgacgttgaacatctcctgtcatccacagctcctttggctaaccagccc
agcaaagacccggtacggaggaacaacattcataacaattataagatggccgaagggggc
cagaggaataaggcctcatccgtcttcaaaggaggggaacggtctcttgtggacgcttta
tcggagtatcctggggagttggtgaagacggagagccctaactttgcctgctccgtgctt
ccatctcactggaggtgcaataagagtttgcccgtggctttcaaagttgtttcgttgggg
gaaaccaaggatggaacgatggtgacgatcgcagcgggaaatgatgaaaactactgcgcc
gaattgaaaaacaacacagcagtgatgaagaaccaagtggctcgttttaatgacctgcgt
ttcgttggacgatctggccgtggcaagagcttcacactgtccatcttcatctacaccaac
cctcctcagatcgctacatacaaccgtgcaataaaggtcaccgtagatgggcccagagaa
cctcgaagaccgaaacccaaggaccaggagtcccgtttgatgccccctcccatcatcaac
accggccacacccatccctttggtgagatcagcccccatcatccaaaccaccatattgga
agacagcagtccttccagaaccagagccgtatgcctaggtcttaccctcttagtccaact
tcgggatcgtatgataacatccagcaccaaggacaagcttcaaagccatggtcctactac
aacccttacccaacaacagtagcgcaaccgtcagattcctcaatactaacgccccagatc
aagactgaaccgacagaccttgcgttgctaggtcagcagaactcgactctccaacaatac
cccaagcctgacagcatctaccccacctcgataacaagggccagcgaggtccaggattcc
cggtttgtttacccatccgctcaagccgtcagctccacctcctacacaccttcgtccatg
tccgtgctgtcatccggaggtgattcaccccgcaccatcttgccaatgacacccaatccg
tttcctctatcctctcaggatatcttctccagctccaccactacgcccgtcacgctgaca
tcgccaccctacctgccaaactctcccccgtatcacctgtacccccacctgtacatgtcg
tcgccgtcgtcgcaaacctactacgacggctcccacatacccatgctgccgtcgacgaga
ccggacgagaagcaggagatcaaacaagacaacagaccgcgggacgtcggaggagaaacc
atctcgcaaattccccacccgtcggctgaaatgtcgctgacggtggctctgaactacggc
agccaccctcaaagtcagattgaactgaacacagccaggacaatgggacagagtatgggt
atgcagaatagtggggtcgctctgatgcagcagcatcgaaacaacagtcctgttactaac
atatcaccaatgcaacaaggcatgggacagatgaatattaacaccaccgtcggacactta
cctactgttgatgattcaagaaaagaggacgtctggcggccatactga
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