Lytechinus variegatus (green sea urchin): 121417206
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Entry
121417206 CDS
T11173
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00514
Other types of O-glycan biosynthesis
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121417206
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121417206
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121417206
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121417206
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
O-Glycan
121417206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121417206
NCBI-ProteinID:
XP_041466757
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All DBs
Position
6:complement(21849543..21873465)
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AA seq
371 aa
AA seq
DB search
MAIHQEKLYIFIGIGLASFCVIFLFFRPIETGVHQPLVRCAPQQVVKYVTVKPRAYLNTP
TKDATPAMTRQPTTSQYPRKKTQQQQDDDDRDVDIVLQREKYRQTELNDVFIGVKTTEKY
HSTRLQLILDTWFSLAPEQTYFFTDGEDMEPYQNKTNGHMVNTGCKQIHSPQGLCCKLSA
IFSSFKAFDKRWYCHVDDDNYLNIPQLLALLRGYDHNQDYYLGKPSVTHSIKGKDHLKNT
SAEFWFGTGGAGVCYSKALVPKMMPYASRGKFGETCARAGRPDDMTIGFIVDYLLNGTLT
KIPTFNSHIQNLTRLPTEDLHNQVTLSYSLNDKKIKGPNIINMRPIMEDDPTRFKSFHCT
YFRGYGNCTSS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacaccaagagaaattatacattttcataggtattggattagcgagcttctgc
gttatattcctattttttcgaccaatagagacgggggttcatcaaccgctagtgcgatgc
gcgccgcaacaggtggtgaaatatgtgacggtaaagccccgcgcatatttgaacacgcct
acaaaagatgccacgcctgcgatgactcgtcagccgacgacatcacaatacccaagaaag
aaaacacaacaacaacaggatgatgatgatagagatgttgacattgtattacagagagag
aaataccgacagacagaactcaatgatgtgtttattggtgtgaaaacaactgaaaaatat
catagcacccgactacagctcatcttagatacttggttttcattagctcctgaacagaca
tattttttcacagacggagaagacatggagccatatcagaacaaaacaaacggacatatg
gtcaataccgggtgcaaacagatccattcacctcaaggactctgttgtaaattatccgcc
attttcagttctttcaaagcatttgataaaagatggtattgccacgtggatgacgacaac
tatctgaatatacctcagctgctagccttgctcagagggtatgatcataatcaagattat
taccttggtaaaccaagtgtgacacattctataaaaggcaaagatcatctcaagaatacg
tctgccgaattctggtttggaactggaggagcaggagtttgttatagcaaggcgttagta
ccaaagatgatgccctatgcaagtcgtggaaagtttggagaaacatgcgctagagcgggt
cgtcctgatgatatgaccattggtttcatagtagattacttattaaatgggacattgacg
aagatccccaccttcaactctcatattcaaaacctaacgaggttacccacagaagacctt
cataaccaggtaaccttaagctacagtcttaacgacaaaaaaattaagggacctaatatc
atcaacatgagacctataatggaggatgatcctacccggttcaagtcgttccattgtacc
tatttccgtggatatggaaattgtacctccagttga
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