Lytechinus variegatus (green sea urchin): 121417355
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Entry
121417355 CDS
T11173
Name
(RefSeq) beta-1,4-galactosyltransferase 5-like isoform X1
KO
K09905
beta-1,4-galactosyltransferase 5 [EC:
2.4.1.274
2.4.1.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00512
Mucin type O-glycan biosynthesis
lvg00600
Sphingolipid metabolism
lvg01100
Metabolic pathways
Module
lvg_M00066
Lactosylceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121417355
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121417355
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121417355
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.274 glucosylceramide beta-1,4-galactosyltransferase
121417355
Glycosyltransferases [BR:
lvg01003
]
Glycolipid biosynthesis
Glycosphingolipid
121417355
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121417355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
121417355
NCBI-ProteinID:
XP_041466968
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Position
6:complement(30773792..30818481)
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AA seq
407 aa
AA seq
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MIRIIWSSRRLILAWCLALIFTIMISVRTTPRHITRARTKNQESEGLNVSSSLPKGCPTM
DCACTTSSRQDGHKNQPSSDAKCTTHSRFELNKSYQVNVSSIDIASIEDIVFGDDRSCAE
TYVESVSAALMTSSSDKLTPYYKNHTAFIEAEKGGIQIGNYTYSPGGRWKPTNCKPKWKV
AIVIPYRDRLEHLGILLRNLYQVLTLQNLEFGIFVSEQANDNVFNRGLLKNIGYMEATNF
GSWDCVIFHDIDQIPMRATNWYGCDEMPRHLCAYAEELGFKLLYGSIFGGVVGLTAEQMK
KSNGYSNVYWGWGAEDDDLRSRLAKVEYKIHRASGEGYYKTLKHKKKSASQICPERFCLF
SRFAERMEWDGINNTRYTANVTLNLLFTHIAVDARKEDWNIFPKCQK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgataagaatcatatggtcgtcgagacggcttatattagcatggtgtttggcacttata
ttcacaatcatgattagcgtgagaacaacaccccgacatatcaccagggcacggacgaaa
aatcaagaaagtgaaggtttgaatgtgagttcctccttgcctaaggggtgtcctacgatg
gactgtgcttgtactactagctcaaggcaggatggacataaaaaccagccatcatctgac
gcaaaatgtactacgcattcaagatttgaactcaacaaaagctatcaagtcaatgtatca
agtatcgatattgcatctatcgaagatatcgtatttggtgacgatcgttcctgcgcagaa
acgtacgtagagagtgtaagcgcagccttgatgacgtcatcgtctgataaattaacaccg
tactataaaaaccatacagcattcattgaggccgaaaaaggcggtatacaaataggaaat
tacacctattctccagggggaaggtggaaacctacaaattgtaagcctaaatggaaggtc
gcaatcgtcattccatatcgggacagattggaacatctcggaattttattacgtaatctt
taccaagtattaactcttcaaaaccttgagtttggcatcttcgtgtcggaacaggccaat
gataatgtgtttaaccgtggtctattaaagaatatcggatacatggaagcaaccaacttt
ggatcgtgggactgtgtgatatttcacgatatcgaccagataccgatgagggcgacaaac
tggtatggctgcgacgagatgccaagacacttgtgtgcgtacgctgaagagcttggattc
aaattactctacggaagcatatttggcggagttgttgggttaacagcagaacagatgaag
aagtcaaatggatattccaatgtttactgggggtggggtgccgaggatgatgaccttcga
tcaagactcgctaaagttgaatataaaattcatcgagcctcgggcgaaggctactacaag
acgttgaaacataagaagaagtcagcaagccaaatctgccctgaaaggttttgtttgttt
agtcgatttgctgaacgaatggagtgggatggcattaacaatacacgatacaccgccaac
gttacgctcaatctactatttactcacatagctgttgacgcgaggaaggaggactggaac
atatttcctaaatgccagaagtag
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