Lytechinus variegatus (green sea urchin): 121418951
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Entry
121418951 CDS
T11173
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121418951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121418951
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121418951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_13th
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_16th
NUP210_Ig
Ig_NUP210_14th
Ig_NUP210_8th
Big_2
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
121418951
NCBI-ProteinID:
XP_041469119
LinkDB
All DBs
Position
7:29856340..29897573
Genome browser
AA seq
1913 aa
AA seq
DB search
MALTRLLHVTLGVVIFVTSLIHFSSCTGHKLNVPRIMLPYYAATPINFTLEGSDGCYTWR
SLRADVASVQPIDQDSGSGCSQKALVTALSTHPTQRTSVVFAEELGSGQVIRCDVIVDQI
ELIDIITTTRILYLGDSPEEFEVRALDDEGNTFSSLEGLEFEWTLLSDYEADNAVDAKSI
LRIVQFKDLPYDPPAHITTMEAGGKQGDRILIEGLRAGSAKVGVKIKSAGFKDVKQSVVR
LIVIDHLTLNPSQDIYILVHAYIYYSVEKIRQGKTTIVTMPSTQYRLALGNASVASLTES
NSMVTGLALGHTQIMLQDRNFKDFRGFKDSLPSANIYVIEPAYLGFVIVPGGNWVLETGH
YYEITIDVYDRESNKMFPSDIPNIRIDTIFPEAYFQVIRSSENGSYHFVKTLQSGITEID
AALVAMIKPDGERAEFEVPIKESQEAEIFDPILVRPEYIAFAYQPGQPGYQYPLKATGGT
GSYVWSSSKRITGTVNVHGLVTTGDTPGMTNVTAADNRNPAHFGLSRVYLLPPSKMIFLD
SRVEGEVGSILHLPLAMEAYYEAGKERVMLTHCGSLPLVTDVADQSIFQKTEPGEKFDVV
SDSCTTLHVKAMSVGHTQVSVTLQQGGVKLQASVTIAAFAPLQPLDPDSVAIVTLAASKT
LVLTGGPQPWVLDPSRYYQNLEAEEQDWVRSTHVRGYGATKNYHIFQVLCRHLGEQTLTV
NVGNDPTARNKFPARSTATVRYLCTQPVSLQLIPVVQQPDLEVPCPIALDSNNQIPVMNG
QDVEILVNAVDSHGRLFHNFSSLVVSWTSTDHNLASYYKPQTSYSDEDGSFPGSRSLRAF
ELTTLKHRQGSVTLTATTTAYDNVLFRRHAIAIPSQVPSVSASLELGLVMEASIDPNRLS
LFNHPSNKASLNLQGGSGHFLIRPNIAGLAEMRYDEKKKQIEVIPLRDGTLVITAYDLCI
ATNQHATAQIHMAGVHTIDLKVVDKVQVDHEIRAAVQVLDSTDQPLSVSYFPLMRLEPVP
GSNIITLRPDMDSSGRDQHTAYYTVHGASIGFTTLAFTAMSKSGHTVSSKLRDIQVFPPL
KLTPRNITLIVTSLFQVRSTGGPQPQSQIEYVVQSSNIAKINSSGILHALNLGHTRVTGR
AVGYDQETGSNVVYSEDTIDVYVIELNGIRIHAPLHRLESDTVMPVYAMGLGESETPFTF
GDAIDGLLFEWSVSNDDVIEVEPVFAEDGIYSGAEHNIAMRVRTLNPGEASLRLQVSLTQ
PGRRQIYRDQTLMDEIQIQVFERLELMQPDCPCHSRLLMTPNTQAPIKTNRDGSARMSYR
ILTTSWDDFLTVNQMGVVKAGPKGGQASVEVTAFESFGVNQTTVVHVSIKPVSYIAVHST
TGLTTYDKSLQVFPIGVSPSFAVRFYDNIGERFDATNVKLDYRLHRFDRLQLQSGSDNST
FIGRSAHMGTTILKVWDSESPWIDDYVGIPVGSVVQPDQGLVVGDIVCLRSPLLSSEGQS
GSWSSSENSILKVHRSSGVAMALTPGTVTLTQQLTPNLATTAQVSVGTILRITLDGHDVS
TLSTVPKEGSIRVPVKLNGVSSIQGENCSFEKHAWIFESVTPPFQCTLHFADKNSPVTPS
ELFQVSAGFDASQGQYYCSISQLKTRHTPTFLSTMDTTLTLTARLLSIPGQRQVISEQHS
FKFLPAYSCQQSGLTLTLASRREDITVEGIPAVMDNLQASTNDTDIIALGKPGYAGRTLK
KFPVALVDSSLAQYGPAILHTTVELSNTVTGQRTVVPIKINLVPVKPMSATAEEATVTGW
STVLHLFLQHYQTWLFFLIFILAVAGMVLICYHVFLAPRYYVASSGSGAFLHSPLHRSPA
PPPYFEQSPGFTEYQQSPYRSDSIRQRRAGKSPNRLWSTAYSPQEGASGSPEY
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgactagactgctccatgtgactcttggagttgtcatctttgttacatcttta
atacacttttcatcatgcacaggacacaaattaaacgttcccaggattatgcttccgtac
tacgcagcaactccgatcaatttcaccctcgaaggcagcgatggttgctatacatggcgt
tccttgagagctgatgttgcttctgtacagcctatcgatcaggatagtggtagtggatgt
tcacagaaagcccttgtaactgcattgtccacccatccaacacagagaactagtgttgtg
tttgcagaggaattaggaagtggacaagtaatccgatgtgacgtaatagtcgatcaaatt
gaactgattgacattatcactactacaaggatcctgtatttaggagactctccagaagag
tttgaagtcagagctcttgatgatgaaggcaatacctttagcagcctggaaggattggag
tttgaatggactctcctatcggattatgaagcagacaatgctgtcgatgctaagagcatt
ttaagaattgttcagttcaaagacttgccatatgacccacctgctcatatcaccaccatg
gaagctggtggcaaacagggagatagaatcctcattgaaggtctgagagctgggtcagcc
aaggtcggagtaaagatcaaatcagctggtttcaaggatgtgaagcagagtgttgtacgc
ctcattgtcattgaccatcttacattgaatccatctcaagatatctacatccttgttcat
gcctacatctactacagtgtggagaaaatcagacagggaaagacaacaattgtaaccatg
ccatctacccagtatcgccttgcccttggaaacgcatcagtggcatcacttactgaaagc
aattcaatggtgacaggtctggctttaggacacacacagatcatgcttcaagacaggaat
tttaaagatttcaggggattcaaagacagtctaccatcagcaaatatctatgttattgaa
ccagcttacttgggatttgtgatagtgcctggtggaaattgggtattggagactggccat
tattatgaaataacgattgatgtctatgatagagagagcaacaagatgttcccgtcagac
atacctaatatccgcattgataccatattcccggaggcgtacttccaagtgatacgatcc
agcgagaacggttcataccatttcgtgaagactttacagagtggtatcacagagatcgat
gctgctcttgtggcaatgattaaacctgatggtgagcgagcagagtttgaagtacccatc
aaagagtcccaggaggccgagatatttgaccccatcttagtcagaccagaatacattgcc
tttgcctaccaacctggtcaaccaggctaccaatacccactcaaggcaactggcggtaca
gggagctatgtttggtcatcgtccaagcgcattacagggacggtgaacgttcatggactc
gtgacaacaggagacactccaggaatgaccaatgtcacggctgcagataaccggaatcca
gcacattttggactcagtagggtttatttgttgccaccttctaagatgatcttccttgat
tcccgtgttgagggtgaagtagggtcaattcttcatctgccacttgcaatggaggcttac
tatgaagccggaaaagaaagagtgatgctgactcactgcggatctcttcctcttgtcact
gatgttgctgatcaaagcatcttccagaaaactgaacctggtgaaaagtttgatgtagta
tctgactcctgtaccactcttcatgtgaaggccatgtctgtaggtcacacccaagttagt
gtaacccttcaacaaggcggggtcaagctgcaggcatccgtcaccatcgctgcctttgca
cccctgcaaccgctggatccagatagcgttgccattgttaccttagctgcgtctaagacc
ctggtcttaacaggaggaccacagccttgggtcctggacccatcacgttactaccagaac
cttgaggcagaggaacaggactgggttagatcaacccatgtcagagggtatggtgccaca
aagaactatcacattttccaagtattgtgtcgtcaccttggagagcaaacgctgacggtc
aatgtgggtaatgatcccactgctcgtaataagttccctgcgagatctacagcaacagtc
agatatttatgtacccagcctgtaagtcttcagctcataccagtagtacagcagccagat
ctagaggtaccctgtcctattgctcttgactcaaacaaccagattcctgtcatgaatgga
caagacgtagagattctggtgaatgccgttgacagccatggaaggctctttcataacttt
tcttcattggttgtatcatggaccagcacggatcataacctagcttcctactacaaacca
cagacatcatacagtgatgaggatgggtcgttccctggatcaaggtcactcagagccttt
gaacttacaacattgaagcatcgtcaaggatctgtaacattgacagcaactaccactgca
tatgataatgtgctgtttaggaggcatgctattgcaatcccgagtcaagtacccagtgtg
agtgcatctcttgagttaggtctggtaatggaagctagtattgatccgaacagactatct
ctattcaatcatccatcaaataaagcatcattgaatcttcaaggaggttctggtcacttc
ttaatccgtcctaacatcgcaggtctggcagagatgagatatgatgaaaagaaaaaacaa
attgaggttatccccttacgcgacgggactctggtcatcactgcctacgatctttgcatt
gccactaaccaacatgctacagcacagatacacatggcaggtgtacacaccattgacctc
aaggttgttgacaaggtccaagttgatcatgagatccgagcggcagtccaggtcctagac
tccacagaccagcctctatctgtatcctactttccactcatgaggcttgaaccagtgcca
ggttccaacatcatcacccttagacctgacatggacagctctggtagagatcaacacacg
gcctactacacagtacatggagctagtattggttttacaaccctcgccttcaccgccatg
tctaagagtggccatactgtttcaagtaaactcagggatatacaggtgtttccccctctc
aagttgacaccaaggaacatcacacttattgttacatcattattccaagtgaggagtact
ggaggaccccaaccccagagccagattgagtatgtagtacagagctcaaacattgctaag
atcaacagtagtggtatcttacatgctttgaaccttggtcataccagggttacaggcaga
gctgttggttacgaccaggaaacaggatcaaatgtggtttattctgaggataccatcgat
gtgtacgtcatagagctgaatggcatacgaatccacgctcctctccatcgactcgagtca
gacactgtcatgcccgtgtatgctatgggactgggtgaatcggagaccccgttcacattt
ggtgatgccatcgatggccttctgtttgaatggagtgtgagcaatgatgatgttattgaa
gtggagccagtatttgctgaggatggcatatacagtggagcagagcacaacatagctatg
agggtgagaacattaaatcccggtgaagcctctctaagactacaggtatccctgactcaa
ccaggacgtagacagatctacagggatcaaacactcatggatgaaatacagatccaggtg
tttgagagactagagttgatgcagcctgactgtccatgtcacagcagacttctgatgaca
cctaacacacaagcaccgattaaaactaacagagatgggtcagccaggatgtcatatcgt
atcttgaccacctcttgggatgacttcctgaccgttaaccagatgggtgtggtcaaagcc
gggccaaagggaggtcaagcgtctgtagaggtcaccgcatttgagagctttggagtgaac
cagacaacagttgttcatgtctcgatcaagcctgtatcttacatcgctgtgcattctacc
accggtctaacaacatatgacaagagtctacaagtgtttcccatcggtgtatcaccctcc
tttgctgttcgtttctatgacaacatcggtgaaagatttgacgccaccaatgttaaattg
gactacagactccatagatttgaccgtcttcagttgcagtctggatcagataatagtaca
tttattgggcgatcagcacacatgggaaccactatcctcaaggtgtgggacagtgagagt
ccatggattgatgattatgttggtatcccggtaggcagtgtggtccagcctgatcaaggt
ctggttgtaggtgatattgtctgtttgagatcacctctactctcgtcagaaggtcaaagt
gggtcatggagctcatctgaaaacagcattctcaaagttcataggtcaagtggtgttgcc
atggcgctgacccctggtactgtaaccttgacccagcagctgactcctaatcttgcaaca
acagctcaggtttctgttggtactattctgagaatcacgctagatggtcatgatgtttct
actctctcaacggtacccaaagagggcagcattcgtgttcctgtcaagctgaatggtgtt
tctagtatccaaggcgaaaactgttcctttgagaagcatgcttggatatttgaatcagtg
actccacccttccaatgcacccttcactttgccgataagaactcacctgtaaccccctcg
gagctcttccaagtctcagcaggattcgatgcaagtcaaggtcaatattactgctccatc
agtcagctgaagacgagacacaccccaaccttcctaagcaccatggatacgacccttaca
ctgaccgctcgtcttctcagcatcccaggtcaacgtcaggtcatctccgagcagcattcg
ttcaagttccttcctgcgtactcttgccaacagtctgggctcactctaacccttgcttcc
cgtagagaggatatcacggtagaaggaataccggccgtcatggataacttacaggcctct
accaatgacactgacatcattgccctaggcaagccaggctatgcaggtagaacactcaag
aagttccctgtagcccttgtggactcctcactcgcacagtatggaccagctatcctgcac
acaactgtagaactgtccaacacggttacaggacagcgtactgtggtccctattaagatc
aatcttgttcctgtgaaacctatgagtgctacagcagaagaagccacagtaactggttgg
tctactgtacttcatctgttccttcagcattatcaaacatggctcttcttcctaatcttc
atactagctgtagcaggaatggtgcttatatgctaccatgtcttcctggctcctcgatac
tacgtagcaagttctggatcaggagctttcctccacagtccattgcatcgctcaccggca
ccaccaccatactttgaacaatcaccaggttttacagagtatcagcagagtccgtacaga
tctgattcaatacgacaaagaagggcagggaaatcccctaatagactttggagtacagct
tatagtccacaagaaggagcttctggtagtcctgaatactag
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