Lytechinus variegatus (green sea urchin): 121422094
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Entry
121422094 CDS
T11173
Name
(RefSeq) beta-1,4-galactosyltransferase 5-like
KO
K09905
beta-1,4-galactosyltransferase 5 [EC:
2.4.1.274
2.4.1.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00512
Mucin type O-glycan biosynthesis
lvg00600
Sphingolipid metabolism
lvg01100
Metabolic pathways
Module
lvg_M00066
Lactosylceramide biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121422094
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121422094
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121422094
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.274 glucosylceramide beta-1,4-galactosyltransferase
121422094
Glycosyltransferases [BR:
lvg01003
]
Glycolipid biosynthesis
Glycosphingolipid
121422094
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121422094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
121422094
NCBI-ProteinID:
XP_041472843
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Position
9:complement(35362226..35388813)
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AA seq
493 aa
AA seq
DB search
MSGRGKGGKGLGKGGAKRHRKVLRDHIQESFRMTLQGSQTAFKVVLVFCLCCVAALVVVL
SITTDSTGLMPFKSPGFSRSSIRSRFNSTYAPQTESGNQTNTGSSKPSTSIEMSSESTLN
VTGQDNSTEQAQTKAVKKEKGIPNPLKPETSFRQPPPAQVLTTCPNQDVLPNERLTPNKE
ATTVQRVNEFVFGKFLPKTQAMTDVANQTLPSIITKRKSIREAADEIDKTLTELNLAVDF
DDYRLLPGGHWIPLSCNPRWKVAIVVPFRNRFHHLPIFLRHIVPLLKRQKLEFSIFIAEQ
RNDERFNRAMLMNVGFVEALNFTNYDCVIFHDIDHLAVNVKNYFGCDNMPRHFISGEKIW
EWKIIYENLFGGVTGLTTQQFYDINGLPNVYWGWGGEDDEFAKRVKAKGFKRSRPKGEIG
YFDSVVHEKKESSPTNEARFCLLNNYVHRKTTDGVSNLRYEQPTIELHPLYTNVSVNIQK
LPWNPRWPRCEGQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgcggaaaaggaggaaagggtcttggaaagggtggtgccaaacgtcatcgc
aaggttctacgagaccacatccaagaatcttttagaatgacgcttcagggaagtcaaact
gcctttaaagtagtccttgtcttctgtctatgctgtgtggcggctctcgtggtagtactc
tcgataactaccgactcgacgggattaatgccctttaaatctccaggcttttccagaagt
tctatccgctcaagattcaattcaacttacgcaccacaaaccgaaagcggtaatcaaact
aataccggaagttcaaaaccatcaacgtctattgagatgtcatctgaatcgacattgaat
gtcacaggtcaagataattcaacggaacaagcacagaccaaagctgtaaagaaagaaaaa
ggtattccgaatcctttaaagccggaaacatcctttcgacaacctccaccagcacaggtg
ttgacgacatgcccaaatcaagatgtcctcccaaatgagaggcttacaccaaacaaagaa
gctacgaccgttcaaagggtcaacgaattcgtattcgggaagttcttaccaaagacacaa
gccatgactgacgtggccaaccaaactctcccgagcatcatcacgaagcgcaagtcaatc
agggaagcagcggacgagattgataagacgctcacggagctgaacctcgctgtcgacttc
gatgactaccggctacttcctggtggtcattggatcccactgtcgtgtaacccccgttgg
aaggtcgctattgtggtaccgtttagaaatcgctttcatcacctcccaatttttctccgc
cacattgtgccattgctcaaaagacaaaagctggaattctccatctttattgccgagcag
agaaatgacgaacgttttaaccgagcgatgttaatgaacgttggtttcgtcgaggcccta
aattttacgaactacgactgcgtgatcttccacgacatcgatcaccttgccgtcaatgtt
aaaaattattttggctgtgataacatgccccgacattttatatccggagaaaaaatatgg
gagtggaagataatatacgaaaatctctttggtggagtgacggggcttaccacacaacag
ttctatgacatcaatggtctgcccaatgtctactggggatggggtggtgaagacgatgaa
ttcgcaaagagggtaaaggctaagggttttaaacgatcgcgacccaaaggggagatcggg
tacttcgattccgtcgttcacgaaaaaaaggagtcaagtccgactaacgaagcaaggttt
tgtcttcttaataactacgttcataggaaaaccaccgacggtgtatcaaacttgagatat
gaacaaccgacaatagaactgcatcctctttataccaacgtctctgtcaacatccagaag
ctaccttggaatcctcgttggccaaggtgtgaagggcagtag
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