Lytechinus variegatus (green sea urchin): 121423100
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Entry
121423100 CDS
T11173
Name
(RefSeq) fringe glycosyltransferase-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00514
Other types of O-glycan biosynthesis
lvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121423100
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121423100
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121423100
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121423100
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
O-Glycan
121423100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121423100
NCBI-ProteinID:
XP_041474323
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All DBs
Position
10:complement(5377825..5413302)
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AA seq
343 aa
AA seq
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MEYAKKMRPSPRKVLCVVMYFASAAFICFITRGIYLRFDYKRVIFPAAEPLVCNRNRSVH
RRPPGTESKTEISDVFIGVKTTRKYHSSRLQLILDTWYSLAPEEIYFFTDVDDSSLQEKT
NGHIVNTGCGQGYAMPILCCKLSIIISMFHETGKRWLCHVDDDNYLNVPNLVNLLRQYDH
NQDHYIGRESLPKPKVVVDSAIRKEVQFWFATGGAGVCYSRALISKMMIYASKENFQKTC
ARIGQPDDVTIGFIVESLLNRTLTKVCTLNSHLQTMADIPVGEQKKQVTFGYDLKDLRLK
GVNVINMTAVVNDDPTRLKSFHCTFFRGYGNCPEIIPEPPPAN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgccaagaagatgcgtccttctccgaggaaggttctctgtgttgtgatgtat
tttgcatcggctgccttcatctgtttcatcacgcgaggaatttatctccgttttgactac
aagagggtcatcttccccgcggcagagcccctggtctgtaatcgtaacaggtctgtccat
cgaagaccgccaggaacagagagcaaaacagaaatatcagatgtttttattggagtgaaa
acaactcggaaatatcacagcagtagactgcaactcatcttagatacatggtattcattg
gctcccgaagagatctattttttcactgatgtagatgattcaagcttacaagaaaaaaca
aatggtcatatagtcaacactgggtgcggacaaggatatgcaatgccgatcctatgctgt
aaattgtcaattataatcagtatgttccatgagaccggtaaaaggtggttatgccacgtc
gatgacgacaactatttgaatgtaccgaatttggtaaacttactcaggcagtatgatcat
aatcaagatcattacatcggccgagaaagcctccctaaacctaaggtggtcgtcgattcg
gcgatacggaaggaagtacaattttggtttgcaactggcggcgcaggggtttgttatagc
agggcgttgatttctaagatgatgatatatgcaagtaaagaaaactttcagaaaacatgc
gccagaataggtcaacccgatgacgtcacaattggcttcattgtagaatccttattgaac
aggacactaaccaaagtgtgtaccctcaattctcacttacaaacgatggctgatattccc
gtgggagaacagaaaaaacaggttaccttcggttacgatcttaaggacctgagacttaag
ggcgtcaatgtgatcaatatgacagctgtggtaaatgatgaccctaccagactcaaatca
ttccattgtaccttcttccgtggatacggaaactgcccagaaatcattcctgaacctcca
ccagccaactaa
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