Lytechinus variegatus (green sea urchin): 121424079
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Entry
121424079 CDS
T11173
Name
(RefSeq) perlucin-like protein
KO
K06563
C-type lectin domain family 4 member L/M
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03260
Virion - Human immunodeficiency virus
lvg03264
Virion - Flavivirus and Alphavirus
lvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lvg03273
Virion - Lassa virus and SFTS virus
lvg04145
Phagocytosis
lvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
121424079
03264 Virion - Flavivirus and Alphavirus
121424079
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121424079
03273 Virion - Lassa virus and SFTS virus
121424079
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121424079
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121424079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121424079
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121424079
04515 Cell adhesion molecules [BR:
lvg04515
]
121424079
04090 CD molecules [BR:
lvg04090
]
121424079
04091 Lectins [BR:
lvg04091
]
121424079
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
121424079
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
121424079
Cell adhesion molecules [BR:
lvg04515
]
Lectins
Selectins and C-type lectins
121424079
CD molecules [BR:
lvg04090
]
Proteins
121424079
Lectins [BR:
lvg04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
121424079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
PAN_1
Clec-141-158
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
121424079
NCBI-ProteinID:
XP_041475599
LinkDB
All DBs
Position
11:15530882..15548556
Genome browser
AA seq
252 aa
AA seq
DB search
MFFIRILEGLIIVGIVFLSRTLSTESAGACPAGWRLFSSSLDTKCYFVVQSLYMWEEARE
VCQNSGARVIEVDSEDESEFIVEELIDDVTFTSTKKAWLDCTNLGRSLHEWVCGPDDHEL
LTTYTNWKPGEPNNFNDENCLEIYHDGIWNDKECDGRRLTICERPAGFVSKSISMKRYGT
WPPRCLRNHVIQIIHSASLVECVSRCLAMGESCLSLNHFEGTRECQLNDANDVTDSADFQ
ETNNCRYYRLLV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcattcgcattttggaaggattaattatcgttggcattgtttttctcagtcgt
accttgtcgacggaatctgctggagcttgccccgccggctggagactgttttcatcttca
ttggacacgaagtgttactttgtggtacagagcctctacatgtgggaggaagcccgtgag
gtctgccaaaactcaggcgcgcgggtcatcgaagtcgattcggaggacgagagcgagttc
atcgtcgaggagctgattgatgacgtcacatttacatctacaaagaaggcgtggttagat
tgtaccaaccttggaaggtccctgcacgaatgggtttgtggccccgatgatcacgaacta
ttaactacatacacaaactggaaacctggtgaaccaaacaactttaatgacgaaaactgc
ttagaaatctatcacgatggaatctggaatgataaagaatgtgatggacggagattgacc
atttgtgaaagacctgccggatttgtctcgaaaagtatttccatgaaaagatacggaacc
tggccaccacgatgcctccggaatcacgtgatccagattatccactcagcatcactcgtg
gaatgtgtcagccgttgcctggctatgggagaaagctgcttgtctttaaatcatttcgag
gggacaagagaatgtcaactgaatgatgccaacgatgtgaccgattccgcagattttcaa
gaaacaaataactgcagatattatcgacttctggtgtaa
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