Lytechinus variegatus (green sea urchin): 121424079
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Entry
121424079 CDS
T11173
Name
(RefSeq) perlucin-like protein
KO
K06563
C-type lectin domain family 4 member L/M
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03260
Virion - Human immunodeficiency virus
lvg03264
Virion - Flavivirus and Alphavirus
lvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lvg03273
Virion - Lassa virus and SFTS virus
lvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
121424079
03264 Virion - Flavivirus and Alphavirus
121424079
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121424079
03273 Virion - Lassa virus and SFTS virus
121424079
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121424079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121424079
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lvg04054
]
121424079
04515 Cell adhesion molecules [BR:
lvg04515
]
121424079
04090 CD molecules [BR:
lvg04090
]
121424079
04091 Lectins [BR:
lvg04091
]
121424079
Membrane trafficking [BR:
lvg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
121424079
Pattern recognition receptors [BR:
lvg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
121424079
Cell adhesion molecules [BR:
lvg04515
]
Lectins
Selectins and C-type lectins
121424079
CD molecules [BR:
lvg04090
]
Proteins
121424079
Lectins [BR:
lvg04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
121424079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
PAN_1
CDtoxinA
Motif
Other DBs
NCBI-GeneID:
121424079
NCBI-ProteinID:
XP_041475599
LinkDB
All DBs
Position
11:15530882..15548556
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AA seq
252 aa
AA seq
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MFFIRILEGLIIVGIVFLSRTLSTESAGACPAGWRLFSSSLDTKCYFVVQSLYMWEEARE
VCQNSGARVIEVDSEDESEFIVEELIDDVTFTSTKKAWLDCTNLGRSLHEWVCGPDDHEL
LTTYTNWKPGEPNNFNDENCLEIYHDGIWNDKECDGRRLTICERPAGFVSKSISMKRYGT
WPPRCLRNHVIQIIHSASLVECVSRCLAMGESCLSLNHFEGTRECQLNDANDVTDSADFQ
ETNNCRYYRLLV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcattcgcattttggaaggattaattatcgttggcattgtttttctcagtcgt
accttgtcgacggaatctgctggagcttgccccgccggctggagactgttttcatcttca
ttggacacgaagtgttactttgtggtacagagcctctacatgtgggaggaagcccgtgag
gtctgccaaaactcaggcgcgcgggtcatcgaagtcgattcggaggacgagagcgagttc
atcgtcgaggagctgattgatgacgtcacatttacatctacaaagaaggcgtggttagat
tgtaccaaccttggaaggtccctgcacgaatgggtttgtggccccgatgatcacgaacta
ttaactacatacacaaactggaaacctggtgaaccaaacaactttaatgacgaaaactgc
ttagaaatctatcacgatggaatctggaatgataaagaatgtgatggacggagattgacc
atttgtgaaagacctgccggatttgtctcgaaaagtatttccatgaaaagatacggaacc
tggccaccacgatgcctccggaatcacgtgatccagattatccactcagcatcactcgtg
gaatgtgtcagccgttgcctggctatgggagaaagctgcttgtctttaaatcatttcgag
gggacaagagaatgtcaactgaatgatgccaacgatgtgaccgattccgcagattttcaa
gaaacaaataactgcagatattatcgacttctggtgtaa
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